Miyakogusa Predicted Gene

Lj0g3v0261699.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0261699.1 CUFF.17215.1
         (330 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80745 similar to UniRef100_A7PJL0 Cluster: Chromosome...   252   1e-66

>gnl|LJGI|TC80745 similar to UniRef100_A7PJL0 Cluster: Chromosome chr12 scaffold_18,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_18, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (45%)
          Length = 1015

 Score =  252 bits (127), Expect = 1e-66
 Identities = 195/218 (89%), Gaps = 4/218 (1%)
 Strand = Plus / Minus

                                                                       
Query: 97  aagaaggggaaaaaatgtggttacattat---cctatataaaaccaataatctcaaagat 153
           |||||||||||||||||| ||||||||||   ||| ||||||||||||||||||||||||
Sbjct: 929 aagaaggggaaaaaatgtagttacattattatcctgtataaaaccaataatctcaaagat 870

                                                                       
Query: 154 attggcaaaaagtgtatgttagnnnnnnnnttggatgatgaagttgaactgcatcatctg 213
           ||||||||||||||||||| ||        || |||||||||||| ||||||||||||||
Sbjct: 869 attggcaaaaagtgtatgtgagaaaaaaa-ttagatgatgaagtttaactgcatcatctg 811

                                                                       
Query: 214 acagtagaagcaacagtgtgtgcccacaatctgagactatctttcatgtcaatttcattt 273
           ||||| |||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 810 acagttgaagcaactgtatgtgcccataatctgagactatctttcatgtcgatttcattt 751

                                                 
Query: 274 tttaaagaagggactttccaattcatcaaagggttctc 311
           || ||||||||||| |||||||||||||||||||||||
Sbjct: 750 ttcaaagaagggaccttccaattcatcaaagggttctc 713