Miyakogusa Predicted Gene

Lj0g3v0261509.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0261509.1 Non Chatacterized Hit- tr|I3SGU5|I3SGU5_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,65.75,1e-18,seg,NULL; Tocopherol_cycl,Tocopherol
cyclase,CUFF.17203.1
         (342 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81420 similar to UniRef100_Q7XAF0 Cluster: Tocopherol...   543   e-154

>gnl|LJGI|TC81420 similar to UniRef100_Q7XAF0 Cluster: Tocopherol cyclase; n=1;
           Eucalyptus gunnii|Rep: Tocopherol cyclase - Eucalyptus
           gunnii (Cider tree), partial (32%)
          Length = 764

 Score =  543 bits (274), Expect = e-154
 Identities = 321/342 (93%), Gaps = 2/342 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaaccaccaagctctggaactctccacactttcctttctccaccaccgccaatgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  atggaaaccaccaagctctggaactctccacactttcctttctccaccaccgccaatgcc 133

                                                                       
Query: 61  aatgccaatgccagacccacacaccgcgtttctctcaaacttccatttccatcaannnnn 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 134 aatgccaatgccagacccacacaccgcgtttctctcaaacttccatttccatcaacacca 193

                                                                       
Query: 121 nnnnnnnnnnnnnnttcccgcctccacgtagctcccattgcgtactcgccaacaccaccc 180
                         ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ccaccaccaccaccttcccgcctccacgtagctcccattgcgtactcgccaacaccaccc 253

                                                                       
Query: 181 aatcgagaccttcgaacccctcatagcgggtaccattttgatggttcagctcggaaattc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aatcgagaccttcgaacccctcatagcgggtaccattttgatggttcagctcggaaattc 313

                                                                       
Query: 241 tttgagggttggtacttcaaggtgtcgattccggagcggaggcagagtttctgcttcata 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 314 tttgagggttggtacttcaaggtgtcgattccggagcggaggcagagtttctgcttc--a 371

                                                     
Query: 301 tgtattcggtggagaatcctgcgtttcccaacccattgacgc 342
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgtattcggtggagaatcctgcgtttcccaacccattgacgc 413