Miyakogusa Predicted Gene

Lj0g3v0260059.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0260059.1 tr|A9RVJ3|A9RVJ3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_119940,36.7,0.00000000000001,UNCHARACTERIZED,NULL,
CUFF.17140.1
         (351 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70726 similar to UniRef100_A7PVT9 Cluster: Chromosome...   654   0.0  
gnl|LJGI|TC66305 similar to UniRef100_A2Q4U5 Cluster: Tubulin bi...   182   1e-45

>gnl|LJGI|TC70726 similar to UniRef100_A7PVT9 Cluster: Chromosome chr8 scaffold_34,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_34, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (30%)
          Length = 874

 Score =  654 bits (330), Expect = 0.0
 Identities = 344/351 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcttgatcctcatgattcattatctcattcagcaggtgtttctgatgttcaagctgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 atgcttgatcctcatgattcattatctcattcagcaggtgtttctgatgttcaagctgag 216

                                                                       
Query: 61  tctgctacgcagctggaccctgatcagttcacgaattttgtgattccagactggattgct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tctgctacgcagctggaccctgatcagttcacgaattttgtgattccagactggattgct 276

                                                                       
Query: 121 ggagattccaccgtaactgccaaaaacaacccatttacattaccagatgtgtatgtggct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ggagattccaccgtaactgccaaaaacaacccatttacattaccagatgtgtatgtggct 336

                                                                       
Query: 181 tcacagcatagaaatcnnnnnnncttaggggagataaggaaattattacaagaagcttct 240
           ||||||||||||||||       |||||||||||||||||||||||||||||||||||||
Sbjct: 337 tcacagcatagaaatcaaaaaaacttaggggagataaggaaattattacaagaagcttct 396

                                                                       
Query: 241 ttagaagagagccgtaaacgagaattctcatctgcgcttcatgtgtacttcaaggactgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ttagaagagagccgtaaacgagaattctcatctgcgcttcatgtgtacttcaaggactgg 456

                                                              
Query: 301 ttatatgcttctgggaacattcgtcaactgtattgtctacaaggtgattaa 351
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ttatatgcttctgggaacattcgtcaactgtattgtctacaaggtgattaa 507


>gnl|LJGI|TC66305 similar to UniRef100_A2Q4U5 Cluster: Tubulin binding cofactor C;
           n=1; Medicago truncatula|Rep: Tubulin binding cofactor C
           - Medicago truncatula (Barrel medic), partial (34%)
          Length = 1052

 Score =  182 bits (92), Expect = 1e-45
 Identities = 280/345 (81%)
 Strand = Plus / Plus

                                                                       
Query: 5   ttgatcctcatgattcattatctcattcagcaggtgtttctgatgttcaagctgagtctg 64
           |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 222 ttgatcctcatgattcattatctcatccggcaggtgtctctgatgttcaagctgagtctg 281

                                                                       
Query: 65  ctacgcagctggaccctgatcagttcacgaattttgtgattccagactggattgctggag 124
           |||| | | ||||||||||||||||||| ||||||||||||||| |  || |||  || |
Sbjct: 282 ctacacgggtggaccctgatcagttcactaattttgtgattccaaatgggcttggaggcg 341

                                                                       
Query: 125 attccaccgtaactgccaaaaacaacccatttacattaccagatgtgtatgtggcttcac 184
           | |||||||   || | |||  |||||| ||  ||||||| || |  |||  ||| || |
Sbjct: 342 agtccaccgggtctacaaaagtcaacccgttcgcattacctgacgcttatagggcatctc 401

                                                                       
Query: 185 agcatagaaatcnnnnnnncttaggggagataaggaaattattacaagaagcttctttag 244
           | |||| |||||        ||| ||||||||||| |  | |||  |||||| |||||||
Sbjct: 402 aacataaaaatcaaaataatttaagggagataaggcagctcttaagagaagcatctttag 461

                                                                       
Query: 245 aagagagccgtaaacgagaattctcatctgcgcttcatgtgtacttcaaggactggttat 304
           |||| || |||||||| ||||| ||||| || || ||||||||||||||||| ||| | |
Sbjct: 462 aagaaagtcgtaaacgcgaattgtcatcggccctccatgtgtacttcaaggagtggcttt 521

                                                        
Query: 305 atgcttctgggaacattcgtcaactgtattgtctacaaggtgatt 349
           ||||||| ||||||||||||||||| || |||||||| |||||||
Sbjct: 522 atgcttccgggaacattcgtcaactttactgtctacatggtgatt 566