Miyakogusa Predicted Gene
- Lj0g3v0259629.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0259629.1 tr|G7L4H1|G7L4H1_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_7g061010 PE=4 SV=1,43.86,2.3,A Receptor for
Ubiquitination Targets,F-box domain, cyclin-like; F-box domain,F-box
domain, cyclin-l,CUFF.17101.1
(1219 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79482 weakly similar to UniRef100_A7Q9Q9 Cluster: Chr... 80 4e-14
gnl|LJGI|TC67010 weakly similar to UniRef100_A4UV34 Cluster: F-b... 80 4e-14
gnl|LJGI|BG662160 weakly similar to UniRef100_A7PQD5 Cluster: Ch... 78 1e-13
gnl|LJGI|DC598731 similar to UniRef100_Q2HS69 Cluster: Cyclin-li... 72 9e-12
gnl|LJGI|BP031190 similar to UniRef100_A7Q0L1 Cluster: Chromosom... 72 9e-12
gnl|LJGI|TC73392 72 9e-12
gnl|LJGI|GO035798 weakly similar to UniRef100_Q12X80 Cluster: 4F... 70 4e-11
gnl|LJGI|TC59517 weakly similar to UniRef100_Q2HRF5 Cluster: Cyc... 70 4e-11
gnl|LJGI|TC78617 similar to UniRef100_A2Q4Y0 Cluster: F-box prot... 66 6e-10
gnl|LJGI|CB826878 similar to UniRef100_Q9BKD3 Cluster: TSO45-4B;... 54 2e-06
>gnl|LJGI|TC79482 weakly similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 551
Score = 79.8 bits (40), Expect = 4e-14
Identities = 91/108 (84%)
Strand = Plus / Plus
Query: 143 ttgaaatcttgtcatgtcttccagtaaaatctctcatgcgattcaagtctgtgtccaaat 202
|||||||||| || || ||||| |||||||||||| ||| ||||| | |||||||||
Sbjct: 40 ttgaaatcttatcttggcttcctgtaaaatctctcctgcaattcagggtggtgtccaaaa 99
Query: 203 catggaagtctctcatgtctgattctcagttagtaaaactgctccttc 250
||||||| ||| |||| |||||| ||||||| |||||||||| |||||
Sbjct: 100 catggaaatctttcatctctgatcctcagttcgtaaaactgcaccttc 147
Score = 71.9 bits (36), Expect = 9e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 629 atgtttacaacatgggtgataattgttggaggacaattca 668
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 397 atgtttacaacatgggtgataattgttggagaacaattca 436
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 557 ttgggtttggttatgattcttcaacggacacctacaaagtggt 599
|||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 325 ttgggtttggttatgattgttcaagtgacacctacaaggtggt 367
>gnl|LJGI|TC67010 weakly similar to UniRef100_A4UV34 Cluster: F-box domain-containing
protein; n=2; Solanum|Rep: F-box domain-containing
protein - Solanum tuberosum (Potato), partial (15%)
Length = 1074
Score = 79.8 bits (40), Expect = 4e-14
Identities = 91/108 (84%)
Strand = Plus / Plus
Query: 143 ttgaaatcttgtcatgtcttccagtaaaatctctcatgcgattcaagtctgtgtccaaat 202
|||||||||| || || ||||| |||||||||||| ||| ||||| | |||||||||
Sbjct: 67 ttgaaatcttatcttggcttcctgtaaaatctctcctgcaattcagggtggtgtccaaaa 126
Query: 203 catggaagtctctcatgtctgattctcagttagtaaaactgctccttc 250
||||||| ||| |||| |||||| ||||||| |||||||||| |||||
Sbjct: 127 catggaaatctttcatctctgatcctcagttcgtaaaactgcaccttc 174
Score = 71.9 bits (36), Expect = 9e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 629 atgtttacaacatgggtgataattgttggaggacaattca 668
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 568 atgtttacaacatgggtgataattgttggagaacaattca 607
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 557 ttgggtttggttatgattcttcaacggacacctacaaagtggt 599
|||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 496 ttgggtttggttatgattgttcaagtgacacctacaaggtggt 538
>gnl|LJGI|BG662160 weakly similar to UniRef100_A7PQD5 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 430
Score = 77.8 bits (39), Expect = 1e-13
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 124 ctccctgaagaactggtggttgaaatcttgtcatgtcttccagtaaaatctctcatgcga 183
|||||||||||||| | | |||||||||||||| ||||| || |||||||| |||||
Sbjct: 8 ctccctgaagaactccggctagaaatcttgtcatggcttccggtgaaatctctggtgcga 67
Query: 184 ttcaagtctgtgtccaaatcatggaagtctctcatgtctgattctca 230
|||| || |||||| || |||||||||||| |||| || ||||||||
Sbjct: 68 ttcaggtgtgtgtctaagtcatggaagtctatcatctccgattctca 114
>gnl|LJGI|DC598731 similar to UniRef100_Q2HS69 Cluster: Cyclin-like F-box; F-box
protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (14%)
Length = 592
Score = 71.9 bits (36), Expect = 9e-12
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 145 gaaatcttgtcatgtcttccagtaaaatctctcatgcgattcaagtctgtgtccaaatca 204
|||||||| ||||| |||| ||||||||||| ||||||||| || ||| ||||| |||
Sbjct: 64 gaaatcttatcatgggttcctgtaaaatctctggtgcgattcaggtgtgtatccaagtca 123
Query: 205 tggaagtctctcatgtctgattctcagttagtaaaactgctccttcac 252
||||| |||||||| |||||| |||| || || || |||| |||||||
Sbjct: 124 tggaactctctcatctctgatcctcaattcgtgaacctgcaccttcac 171
Score = 54.0 bits (27), Expect = 2e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 629 atgtttacaacatgggtgataattgttggag 659
|||||||||||||||||||||| ||||||||
Sbjct: 559 atgtttacaacatgggtgataaatgttggag 589
>gnl|LJGI|BP031190 similar to UniRef100_A7Q0L1 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 488
Score = 71.9 bits (36), Expect = 9e-12
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 1106 ttctctatacccttagagatagcaaattagaacgcaagaaaattgctgatgaagttcgtt 1165
||||||||||||| ||| || | ||||||||| | | |||||||| | ||||||| | |
Sbjct: 450 ttctctataccctcagacatggtaaattagaaggaacgaaaattgataatgaagtctgct 391
Query: 1166 tttattatgccgaaaattacattgaaagtttggttt 1201
||| ||||||||| ||||| ||||||||||||||||
Sbjct: 390 tttgttatgccgagaattatattgaaagtttggttt 355
>gnl|LJGI|TC73392
Length = 647
Score = 71.9 bits (36), Expect = 9e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 629 atgtttacaacatgggtgataattgttggaggacaattca 668
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 433 atgtttacaacatgggtgataattgttggagaacaattca 472
>gnl|LJGI|GO035798 weakly similar to UniRef100_Q12X80 Cluster: 4Fe-4S ferredoxin,
iron-sulfur binding; n=1; Methanococcoides burtonii DSM
6242|Rep: 4Fe-4S ferredoxin, iron-sulfur binding -
Methanococcoides burtonii (strain DSM 6242), partial
(10%)
Length = 581
Score = 69.9 bits (35), Expect = 4e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 955 tggcaaatgaaggagtttggagtacaccaatcttggactaagttgtt 1001
||||||||||||||||||||||||||| | ||||||||| |||||||
Sbjct: 81 tggcaaatgaaggagtttggagtacacaagtcttggactcagttgtt 127
>gnl|LJGI|TC59517 weakly similar to UniRef100_Q2HRF5 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (42%)
Length = 1382
Score = 69.9 bits (35), Expect = 4e-11
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 124 ctccctgaagaactggtggttgaaatcttgtcatgtcttccagtaaaatctctcatgcga 183
|||||||||||||| || | |||||||| || | |||||| || |||||||| |||||
Sbjct: 78 ctccctgaagaactcgttgaagaaatcttatcttttcttccggtgaaatctctagtgcga 137
Query: 184 ttcaagtctgtgtccaaatcatggaagtctctcat 218
|||||||||||||| || |||||||| ||| ||||
Sbjct: 138 ttcaagtctgtgtcaaagtcatggaactctttcat 172
Score = 58.0 bits (29), Expect = 1e-07
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 955 tggcaaatgaaggagtttggagtacaccaatcttggactaagttgttta 1003
||||||||||| ||||||||||| ||| | ||||||||| |||||||||
Sbjct: 892 tggcaaatgaaagagtttggagtgcacaattcttggactcagttgttta 940
Score = 52.0 bits (26), Expect = 8e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 559 gggtttggttatgattcttcaacggacacctacaaagt 596
|||||||||||||||| ||||| ||||||||||||||
Sbjct: 466 gggtttggttatgattgttcaagtgacacctacaaagt 503
>gnl|LJGI|TC78617 similar to UniRef100_A2Q4Y0 Cluster: F-box protein interaction
domain; n=1; Medicago truncatula|Rep: F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (8%)
Length = 518
Score = 65.9 bits (33), Expect = 6e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 953 tatggcaaatgaaggagtttggagtacaccaatcttggactaagttgtttagcatta 1009
||||||||||||||||||||||||| ||| | ||||||||| | ||||||| |||||
Sbjct: 62 tatggcaaatgaaggagtttggagtgcacgagtcttggactcaattgtttaacatta 118
>gnl|LJGI|CB826878 similar to UniRef100_Q9BKD3 Cluster: TSO45-4B; n=1; Taenia
solium|Rep: TSO45-4B - Taenia solium (Pork tapeworm),
partial (5%)
Length = 635
Score = 54.0 bits (27), Expect = 2e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 955 tggcaaatgaaggagtttggagtacaccaatcttggactaagttgtt 1001
||||||||||||||||||||||| ||| | || |||||| |||||||
Sbjct: 456 tggcaaatgaaggagtttggagtgcacaagtcatggactcagttgtt 502