Miyakogusa Predicted Gene
- Lj0g3v0259429.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0259429.1 tr|A8IE47|A8IE47_CHLRE Lipid-binding START
protein OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_188173,39.52,8e-17,SUBFAMILY NOT NAMED,NULL;
PHOSPHATIDYLCHOLINE TRANSFER PROTEIN,NULL; no description,START-like
domai,CUFF.17095.1
(627 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73319 similar to UniRef100_A7QJ33 Cluster: Chromosome... 890 0.0
gnl|LJGI|TC77985 similar to UniRef100_A7QJ33 Cluster: Chromosome... 708 0.0
gnl|LJGI|TC68577 weakly similar to UniRef100_A7QJ33 Cluster: Chr... 581 e-165
gnl|LJGI|DC594935 similar to UniRef100_A7QJ33 Cluster: Chromosom... 170 7e-42
>gnl|LJGI|TC73319 similar to UniRef100_A7QJ33 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 1537
Score = 890 bits (449), Expect = 0.0
Identities = 526/551 (95%), Gaps = 4/551 (0%)
Strand = Plus / Plus
Query: 1 atgaaagtgcaatggattcggaagtttcccttcttctgtaaagacagagaatatattatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 atgaaagtgcaatggattcggaagtttcccttcttctgtaaagacagagaatatattatt 1032
Query: 61 ggtagaagaatatgggaatgtgggaggtcatactattgtgtgacaaagggaatagattgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 ggtagaagaatatgggaatgtgggaggtcatactattgtgtgacaaagggaatagattgt 1092
Query: 121 ccttcaatgccaaaacgagacaaacctagacgggttgatgtgtactactctagttggtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 ccttcaatgccaaaacgagacaaacctagacgggttgatgtgtactactctagttggtgc 1152
Query: 181 attcgagcagtggaatcaaaccgaggcaatggacagctaactgcctgtgaagttttactc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1153 attcgagcagtggaatcaaaccgaggcaatggacagctaactgcctgtgaagctttactc 1212
Query: 241 ttccaccacgaggaaatgggtattccctgggaaattgcaaagcttggagtacgaaaaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1213 ttccaccacgaggaaatgggtattccctgggaaattgcaaagcttggagtacgaaaaggg 1272
Query: 301 atgtggggaatggtccagaagattgagcctggtttgagagcctatcaagaggcaagagct 360
||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 1273 atgtggggaatggtccacaacattgagcctggtttgagagcctatcaagaagcaagagct 1332
Query: 361 gctggtgctccactctctcgtgcagcattcatggctcaggtcaacacaaaaattagccct 420
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 1333 gctggtgctccactctctcgtgcagcattcatggctcaggtcnacacnaaaattagccct 1392
Query: 421 gactacttgcaatccattggaaccactgagaattcatcagagactgaaaatgcggtcgcc 480
|||||||||||||||||||||| |||||||||||| || | ||||||||||| ||| ||
Sbjct: 1393 gactacttgcaatccattggaancactgagaattcntccnaaactgaaaatgcngtcccc 1452
Query: 481 ac-ggacaaaccacagggcgtgaacata-cccaagatgctagtcatt--gggggtgctgt 536
| |||||||||||||||| ||||| || ||| | || ||| ||||| |||||||||||
Sbjct: 1453 ccnggacaaaccacagggcntgaacntaccccnaaatcctaatcattgggggggtgctgt 1512
Query: 537 tgctcttgctt 547
||| |||||||
Sbjct: 1513 tgcccttgctt 1523
>gnl|LJGI|TC77985 similar to UniRef100_A7QJ33 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 617
Score = 708 bits (357), Expect = 0.0
Identities = 376/381 (98%), Gaps = 1/381 (0%)
Strand = Plus / Plus
Query: 245 accacgaggaaatgggtattccctgggaaattgcaaagcttggagtacgaaaagggatgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accacgaggaaatgggtattccctgggaaattgcaaagcttggagtacgaaaagggatgt 60
Query: 305 ggggaatggtccagaagattgagcctggtttgagagcctatcaagaggcaagagctgctg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggggaatggtccagaagattgagcctggtttgagagcctatcaagaggcaagagctgctg 120
Query: 365 gtgctccactctctcgtgcagcattcatggctcaggtcaacacaaaaattagccctgact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgctccactctctcgtgcagcattcatggctcaggtcaacacaaaaattagccctgact 180
Query: 425 acttgcaatccattggaaccactgagaattcatcagagactgaaaatgcggtcgccacgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acttgcaatccattggaaccactgagaattcatcagagactgaaaatgcggtcgccacgg 240
Query: 485 acaaaccacagggcgtgaacatacccaagatgctagtcattgggggtgctgttgctcttg 544
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accaaccccagggcgtgaacatacccaagatgctagtcattgggggtgctgttgctcttg 300
Query: 545 cttgtagtctggaccggggactggtgaccaagta-tgttatatttggagttgctagaaga 603
||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||
Sbjct: 301 cttgtagtctggaccggggactggtgacccagtactgttatatttggagttggtagaaga 360
Query: 604 tttgctaatttaggcaaaaga 624
|||||||||||||||||||||
Sbjct: 361 tttgctaatttaggcaaaaga 381
>gnl|LJGI|TC68577 weakly similar to UniRef100_A7QJ33 Cluster: Chromosome chr2
scaffold_105, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_105, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 643
Score = 581 bits (293), Expect = e-165
Identities = 293/293 (100%)
Strand = Plus / Plus
Query: 335 tgagagcctatcaagaggcaagagctgctggtgctccactctctcgtgcagcattcatgg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgagagcctatcaagaggcaagagctgctggtgctccactctctcgtgcagcattcatgg 61
Query: 395 ctcaggtcaacacaaaaattagccctgactacttgcaatccattggaaccactgagaatt 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctcaggtcaacacaaaaattagccctgactacttgcaatccattggaaccactgagaatt 121
Query: 455 catcagagactgaaaatgcggtcgccacggacaaaccacagggcgtgaacatacccaaga 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 catcagagactgaaaatgcggtcgccacggacaaaccacagggcgtgaacatacccaaga 181
Query: 515 tgctagtcattgggggtgctgttgctcttgcttgtagtctggaccggggactggtgacca 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgctagtcattgggggtgctgttgctcttgcttgtagtctggaccggggactggtgacca 241
Query: 575 agtatgttatatttggagttgctagaagatttgctaatttaggcaaaagatag 627
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agtatgttatatttggagttgctagaagatttgctaatttaggcaaaagatag 294
>gnl|LJGI|DC594935 similar to UniRef100_A7QJ33 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 263
Score = 170 bits (86), Expect = 7e-42
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 24 gtttcccttcttctgtaaagacagagaatatattattggtagaagaatatgggaatgtgg 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttcccttcttctgtaaagacagagaatatattattggtagaagaatatgggaatgtgg 60
Query: 84 gaggtcatactattgtgtgacaaagg 109
||||||||||||||||||||||||||
Sbjct: 61 gaggtcatactattgtgtgacaaagg 86
Score = 103 bits (52), Expect = 1e-21
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 107 agggaatagattgtccttcaatgccaaaacgagacaaacctagacgggttgatgtgtact 166
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 204 agggaatagattgtccttccatgcccaaacgagacaaacctagacgggttgatgtgtact 263