Miyakogusa Predicted Gene
- Lj0g3v0258939.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0258939.2 Non Chatacterized Hit- tr|G7KR60|G7KR60_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,75.69,0,seg,NULL; coiled-coil,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.17174.2
(2241 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76020 similar to UniRef100_UPI0000D9D5BC Cluster: PRE... 874 0.0
gnl|LJGI|TC75608 similar to UniRef100_A7QR03 Cluster: Chromosome... 567 e-160
gnl|LJGI|FS338051 weakly similar to UniRef100_A7QR03 Cluster: Ch... 313 3e-84
gnl|LJGI|BW594512 172 6e-42
gnl|LJGI|TC77957 151 2e-35
>gnl|LJGI|TC76020 similar to UniRef100_UPI0000D9D5BC Cluster: PREDICTED: interleukin
1 family, member 9 isoform 2; n=1; Macaca mulatta|Rep:
PREDICTED: interleukin 1 family, member 9 isoform 2 -
Macaca mulatta, partial (8%)
Length = 901
Score = 874 bits (441), Expect = 0.0
Identities = 450/453 (99%)
Strand = Plus / Plus
Query: 1 atggagaatggtcacgatgggaaattggctgagaagttctcagggttggccattaaccag 60
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 449 atggaaaatggtcacgatgggaaattggctgaaaagttctcagggttggccattaaccag 508
Query: 61 cagcatggtcaacaaggtgtgcatgatcaatctaacctttcttctaaccacaatgagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cagcatggtcaacaaggtgtgcatgatcaatctaacctttcttctaaccacaatgagagc 568
Query: 121 ttgtatcaggtcatgaaggctgttgaatctgctgaggttaccattaagcaacaggcagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttgtatcaggtcatgaaggctgttgaatctgctgaggttaccattaagcaacaggcagaa 628
Query: 181 gagaataaccaacttaggtggaaaattgaggaactggaaaaacataggcgcaatgaacaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aagaataaccaacttaggtggaaaattgaggaactggaaaaacataggcgcaatgaacaa 688
Query: 241 gtggatcaaaattcccatccatggaaggagcaagtttatggatcttatgaagctcgtcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gtggatcaaaattcccatccatggaaggagcaagtttatggatcttatgaagctcgtcaa 748
Query: 301 tcaattccatcatcagccataagcaatacaagtaactattctgggagcagcgaaataaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tcaattccatcatcagccataagcaatacaagtaactattctgggagcagcgaaataaat 808
Query: 361 ggaacactgagagtacagccaaatgagcggctccctgtggagaatactggaaactctcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 ggaacactgagagtacagccaaatgagcggctccctgtggagaatactggaaactctcag 868
Query: 421 ttgtcttcaccatttacaaggtcaatctctcca 453
|||||||||||||||||||||||||||||||||
Sbjct: 869 ttgtcttcaccatttacaaggtcaatctctcca 901
>gnl|LJGI|TC75608 similar to UniRef100_A7QR03 Cluster: Chromosome undetermined
scaffold_147, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_147, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(4%)
Length = 659
Score = 567 bits (286), Expect = e-160
Identities = 314/322 (97%), Gaps = 1/322 (0%)
Strand = Plus / Plus
Query: 1921 ctttcgattggatatcttgatatctgggaaccagccacattggccatcaagaaggaaggc 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctttcgattggatatcttgatatctgggaaccagccacattggccatcaagaaggaaggc 60
Query: 1981 tacagtatcaaatgccatggaccaaatggagttgtaatcacagaaaaattttcaccgtcc 2040
||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 61 tacagtatccaatgccatggaccaaatggagttgtaatcacagacagattttcaccgtcc 120
Query: 2041 accacc-gttttgattccttatggacatatttcagagtttattattggttctactagcgc 2099
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cccacccgttttgattccttatggacatatttcagagtttattattggttctactagcgc 180
Query: 2100 cgaacatctgttaagagcagacaacaactcaactgattttagtggtgctagagatgctat 2159
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 181 cgaacatctgttaagagcagacaccaactccactgattttagtggtgctagagatgctat 240
Query: 2160 tgtgctcgttttgagattattcatcctaaaggctggggagaaaaagagagtgaagaagaa 2219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtgctcgttttgagattattcatcctaaaggctggggagaaaaagagagtgaagaagaa 300
Query: 2220 ggggttattctttaacaagtaa 2241
|||||||||||||||| |||||
Sbjct: 301 ggggttattctttaaccagtaa 322
>gnl|LJGI|FS338051 weakly similar to UniRef100_A7QR03 Cluster: Chromosome undetermined
scaffold_147, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_147,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 505
Score = 313 bits (158), Expect = 3e-84
Identities = 170/174 (97%)
Strand = Plus / Plus
Query: 1 atggagaatggtcacgatgggaaattggctgagaagttctcagggttggccattaaccag 60
||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 237 atggaaaatggtcaccatgggaaattggctgaaaagttctcagggttggccattaaccag 296
Query: 61 cagcatggtcaacaaggtgtgcatgatcaatctaacctttcttctaaccacaatgagagc 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 297 cagcatggtcaacaaggtgtgcatgatcaatcaaacctttcttctaaccacaatgagagc 356
Query: 121 ttgtatcaggtcatgaaggctgttgaatctgctgaggttaccattaagcaacag 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttgtatcaggtcatgaaggctgttgaatctgctgaggttaccattaagcaacag 410
Score = 190 bits (96), Expect = 3e-47
Identities = 99/100 (99%)
Strand = Plus / Plus
Query: 221 aacataggcgcaatgaacaagtggatcaaaattcccatccatggaaggagcaagtttatg 280
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aacagaggcgcaatgaacaagtggatcaaaattcccatccatggaaggagcaagtttatg 465
Query: 281 gatcttatgaagctcgtcaatcaattccatcatcagccat 320
||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gatcttatgaagctcgtcaatcaattccatcatcagccat 505
>gnl|LJGI|BW594512
Length = 483
Score = 172 bits (87), Expect = 6e-42
Identities = 93/95 (97%)
Strand = Plus / Plus
Query: 1166 gtatgttgggtcgtcaccagagtggcttgggtggtggggtggcatcaaatgttgatgctg 1225
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5 gtatgttgggtcatcaccagagcggcttgggtggtggggtggcatcaaatgttgatgctg 64
Query: 1226 atgatttggaaagatattcacctcttgcaagcagg 1260
|||||||||||||||||||||||||||||||||||
Sbjct: 65 atgatttggaaagatattcacctcttgcaagcagg 99
>gnl|LJGI|TC77957
Length = 492
Score = 151 bits (76), Expect = 2e-35
Identities = 88/93 (94%)
Strand = Plus / Plus
Query: 2149 agagatgctattgtgctcgttttgagattattcatcctaaaggctggggagaaaaagaga 2208
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 agagatgctattgtgctcnttttgagattattcatcctaaagnctggggagaaaaagaga 60
Query: 2209 gtgaagaagaaggggttattctttaacaagtaa 2241
|||||||||||||| ||||||||| || |||||
Sbjct: 61 gtgaagaagaagggnttattctttcaccagtaa 93