Miyakogusa Predicted Gene
- Lj0g3v0258939.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0258939.1 Non Chatacterized Hit- tr|K3Z576|K3Z576_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si021694,33.72,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.17174.1
(1245 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS338051 weakly similar to UniRef100_A7QR03 Cluster: Ch... 502 e-141
gnl|LJGI|TC76020 similar to UniRef100_UPI0000D9D5BC Cluster: PRE... 454 e-127
gnl|LJGI|BW594512 172 3e-42
>gnl|LJGI|FS338051 weakly similar to UniRef100_A7QR03 Cluster: Chromosome undetermined
scaffold_147, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_147,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 505
Score = 502 bits (253), Expect = e-141
Identities = 265/269 (98%)
Strand = Plus / Plus
Query: 1 atggagaatggtcacgatgggaaattggctgagaagttctcagggttggccattaaccag 60
||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 237 atggaaaatggtcaccatgggaaattggctgaaaagttctcagggttggccattaaccag 296
Query: 61 cagcatggtcaacaaggtgtgcatgatcaatctaacctttcttctaaccacaatgagagc 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 297 cagcatggtcaacaaggtgtgcatgatcaatcaaacctttcttctaaccacaatgagagc 356
Query: 121 ttgtatcaggtcatgaaggctgttgaatctgctgaggttaccattaagcaacagaggcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttgtatcaggtcatgaaggctgttgaatctgctgaggttaccattaagcaacagaggcgc 416
Query: 181 aatgaacaagtggatcaaaattcccatccatggaaggagcaagtttatggatcttatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aatgaacaagtggatcaaaattcccatccatggaaggagcaagtttatggatcttatgaa 476
Query: 241 gctcgtcaatcaattccatcatcagccat 269
|||||||||||||||||||||||||||||
Sbjct: 477 gctcgtcaatcaattccatcatcagccat 505
>gnl|LJGI|TC76020 similar to UniRef100_UPI0000D9D5BC Cluster: PREDICTED: interleukin
1 family, member 9 isoform 2; n=1; Macaca mulatta|Rep:
PREDICTED: interleukin 1 family, member 9 isoform 2 -
Macaca mulatta, partial (8%)
Length = 901
Score = 454 bits (229), Expect = e-127
Identities = 232/233 (99%)
Strand = Plus / Plus
Query: 170 aacagaggcgcaatgaacaagtggatcaaaattcccatccatggaaggagcaagtttatg 229
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aacataggcgcaatgaacaagtggatcaaaattcccatccatggaaggagcaagtttatg 728
Query: 230 gatcttatgaagctcgtcaatcaattccatcatcagccataagcaatacaagtaactatt 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gatcttatgaagctcgtcaatcaattccatcatcagccataagcaatacaagtaactatt 788
Query: 290 ctgggagcagcgaaataaatggaacactgagagtacagccaaatgagcggctccctgtgg 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 ctgggagcagcgaaataaatggaacactgagagtacagccaaatgagcggctccctgtgg 848
Query: 350 agaatactggaaactctcagttgtcttcaccatttacaaggtcaatctctcca 402
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 agaatactggaaactctcagttgtcttcaccatttacaaggtcaatctctcca 901
Score = 329 bits (166), Expect = 2e-89
Identities = 172/174 (98%)
Strand = Plus / Plus
Query: 1 atggagaatggtcacgatgggaaattggctgagaagttctcagggttggccattaaccag 60
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 449 atggaaaatggtcacgatgggaaattggctgaaaagttctcagggttggccattaaccag 508
Query: 61 cagcatggtcaacaaggtgtgcatgatcaatctaacctttcttctaaccacaatgagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cagcatggtcaacaaggtgtgcatgatcaatctaacctttcttctaaccacaatgagagc 568
Query: 121 ttgtatcaggtcatgaaggctgttgaatctgctgaggttaccattaagcaacag 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttgtatcaggtcatgaaggctgttgaatctgctgaggttaccattaagcaacag 622
>gnl|LJGI|BW594512
Length = 483
Score = 172 bits (87), Expect = 3e-42
Identities = 93/95 (97%)
Strand = Plus / Plus
Query: 1115 gtatgttgggtcgtcaccagagtggcttgggtggtggggtggcatcaaatgttgatgctg 1174
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5 gtatgttgggtcatcaccagagcggcttgggtggtggggtggcatcaaatgttgatgctg 64
Query: 1175 atgatttggaaagatattcacctcttgcaagcagg 1209
|||||||||||||||||||||||||||||||||||
Sbjct: 65 atgatttggaaagatattcacctcttgcaagcagg 99