Miyakogusa Predicted Gene
- Lj0g3v0258549.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0258549.1 tr|G7LG16|G7LG16_MEDTR Short internode related
sequence OS=Medicago truncatula GN=MTR_8g039110 PE=4 ,59.77,0,FAMILY
NOT NAMED,NULL; DUF702,Protein of unknown function DUF702; seg,NULL;
put_zinc_LRP1: putative ,CUFF.17006.1
(987 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75511 weakly similar to UniRef100_Q38848 Cluster: LRP... 1635 0.0
gnl|LJGI|BW624287 homologue to UniRef100_A8J174 Cluster: Predict... 674 0.0
gnl|LJGI|BP081321 similar to UniRef100_Q8NA20 Cluster: CDNA FLJ3... 96 5e-19
gnl|LJGI|AV424690 similar to UniRef100_Q2JIB1 Cluster: TonB fami... 84 2e-15
gnl|LJGI|TC73016 similar to UniRef100_A7P7V9 Cluster: Chromosome... 84 2e-15
gnl|LJGI|BP034103 54 2e-06
gnl|LJGI|DC594164 similar to UniRef100_A7QCD6 Cluster: Chromosom... 52 7e-06
gnl|LJGI|TC82758 similar to UniRef100_Q9LTA9 Cluster: CLP protea... 52 7e-06
gnl|LJGI|TC68024 similar to UniRef100_A7NWI8 Cluster: Chromosome... 52 7e-06
>gnl|LJGI|TC75511 weakly similar to UniRef100_Q38848 Cluster: LRP1; n=1; Arabidopsis
thaliana|Rep: LRP1 - Arabidopsis thaliana (Mouse-ear
cress), partial (19%)
Length = 897
Score = 1635 bits (825), Expect = 0.0
Identities = 828/829 (99%)
Strand = Plus / Plus
Query: 1 atgagcatgttaggctttagagacctagttttcatagctccaaacccttctcaagcccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atgagcatgttaggctttagagacctagttttcatagctccaaacccttctcaagcccaa 128
Query: 61 cccttttcagcagaccaccatgccaaccttcctttaccttcatcatcatcatcagcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 cccttttcagcagaccaccatgccaaccttcctttaccttcatcatcatcatcagcagca 188
Query: 121 ctcagcgttggtcttggcattttcccactcctaaccgccactccttgcatgccacaacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ctcagcgttggtcttggcattttcccactcctaaccgccactccttgcatgccacaacct 248
Query: 181 caacctcaacctcaacctcagagcaataccaatgataatgttcataatcataatcaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 caacctcaacctcaacctcagagcaataccaatgataatgttcataatcataatcaagat 308
Query: 241 tgtggcaatggcaacaacaaccccagcttctggaacctcaagatgtgtccaccacaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgtggcaatggcaacaacaaccccagcttctggaacctcaagatgtgtccaccacaactg 368
Query: 301 aattcatctgacagaaaagcagcgatgattatcaacgtggaagaggaaaacggtggtgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aattcatctgacagaaaagcagcgatgattatcaacgtggaagaggaaaacggtggtgtc 428
Query: 361 tatggaagtgactacagagtgtgccaggattgtggaaacagagcaaagaaagattgcagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tatggaagtgactacagagtgtgccaggattgtggaaacagagcaaagaaagattgcagc 488
Query: 421 tacaagagatgcaggacatgttgcaaggggcgtggatttgactgcaacactcacgtgagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tacaagagatgcaggacatgttgcaaggggcgtggatttgactgcaacactcacgtgagg 548
Query: 481 agcacgtggatccctttatctcaccgacgggagcggcatgcggtggctgatggtggtagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 agcacgtggatccctttatctcaccgacgggagcggcatgcggtggctgatggtggtagt 608
Query: 541 gggggtgacagtgatggtggtggtgcttcttctggagctaagaggccaaggtcatcacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gggggtgacagtgatggtggtggtgcttcttctggagctaagaggccaaggtcatcacag 668
Query: 601 aatgctggtggtgctacctctcacagttccaccgccactaatgctgctatgtcaaggaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aatgctggtggtgctacctctcacagttccaccgccactaatgctgctatgtcaaggaac 728
Query: 661 ttaagcttagatactgcctcttgtcaccaagatgctggtttcaaacagtgtttacctgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 ttaagcttagatactgcctcttgtcaccaagatgctggtttcaaacagtgtttacctgga 788
Query: 721 aatattcgtgcacctgctgagtttaagtgccttagagtgtctggtattggcaatggtgaa 780
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 789 aatattcgtgcacctgctgagtttaagtgccttaaagtgtctggtattggcaatggtgaa 848
Query: 781 gatgaatttgcctacatggccacggtccgcattagcggccatgtgttta 829
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 gatgaatttgcctacatggccacggtccgcattagcggccatgtgttta 897
>gnl|LJGI|BW624287 homologue to UniRef100_A8J174 Cluster: Predicted protein; n=1;
Chlamydomonas reinhardtii|Rep: Predicted protein -
Chlamydomonas, partial (0%)
Length = 471
Score = 674 bits (340), Expect = 0.0
Identities = 340/340 (100%)
Strand = Plus / Plus
Query: 1 atgagcatgttaggctttagagacctagttttcatagctccaaacccttctcaagcccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atgagcatgttaggctttagagacctagttttcatagctccaaacccttctcaagcccaa 191
Query: 61 cccttttcagcagaccaccatgccaaccttcctttaccttcatcatcatcatcagcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cccttttcagcagaccaccatgccaaccttcctttaccttcatcatcatcatcagcagca 251
Query: 121 ctcagcgttggtcttggcattttcccactcctaaccgccactccttgcatgccacaacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctcagcgttggtcttggcattttcccactcctaaccgccactccttgcatgccacaacct 311
Query: 181 caacctcaacctcaacctcagagcaataccaatgataatgttcataatcataatcaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 caacctcaacctcaacctcagagcaataccaatgataatgttcataatcataatcaagat 371
Query: 241 tgtggcaatggcaacaacaaccccagcttctggaacctcaagatgtgtccaccacaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgtggcaatggcaacaacaaccccagcttctggaacctcaagatgtgtccaccacaactg 431
Query: 301 aattcatctgacagaaaagcagcgatgattatcaacgtgg 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aattcatctgacagaaaagcagcgatgattatcaacgtgg 471
>gnl|LJGI|BP081321 similar to UniRef100_Q8NA20 Cluster: CDNA FLJ35934 fis clone
TESTI2011315; n=1; Homo sapiens|Rep: CDNA FLJ35934 fis
clone, partial (10%)
Length = 369
Score = 95.6 bits (48), Expect = 5e-19
Identities = 128/155 (82%), Gaps = 6/155 (3%)
Strand = Plus / Minus
Query: 765 tattggcaatggtgaagatgaatttgcctacatggccacggtccgcattagcggccatgt 824
||||||||||||||||||||| ||||| ||| |||||||||| | || || || |||||
Sbjct: 362 tattggcaatggtgaagatgagtttgcttacttggccacggttcatatcagtgggcatgt 303
Query: 825 gtttaaggggtttctgtatgatcaaggggttagtgggagaaatgaaatgccttgtgtttc 884
|||| |||||||||| |||||||| || ||| |||||| ||||| ||||||||||
Sbjct: 302 gtttcaggggtttctttatgatcatggtgttggtgggaaaaatg------cttgtgtttc 249
Query: 885 agaactgcaattgggaaacaatggcagtggaaaga 919
||| |||||| ||||||| ||| | ||||| ||||
Sbjct: 248 agagctgcaactgggaaagaattgtagtgggaaga 214
>gnl|LJGI|AV424690 similar to UniRef100_Q2JIB1 Cluster: TonB family protein; n=1;
Synechococcus sp. JA-2-3B'a(2-13)|Rep: TonB family
protein - Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime), partial
(4%)
Length = 416
Score = 83.8 bits (42), Expect = 2e-15
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 121 ctcagcgttggtcttggcattttcccactcctaaccgccactccttgcatgccacaac 178
||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 231 ctcagtgttggctttggcattttccctctcctaaccgccactccttgcatgccacaac 288
Score = 69.9 bits (35), Expect = 3e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1 atgagcatgttaggctttagagacctagttttcatagctccaaaccc 47
||||||||||||||| | ||||| |||||||||||||||||||||||
Sbjct: 93 atgagcatgttaggcctaagagatctagttttcatagctccaaaccc 139
>gnl|LJGI|TC73016 similar to UniRef100_A7P7V9 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 700
Score = 83.8 bits (42), Expect = 2e-15
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 121 ctcagcgttggtcttggcattttcccactcctaaccgccactccttgcatgccacaac 178
||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 266 ctcagtgttggctttggcattttccctctcctaaccgccactccttgcatgccacaac 323
Score = 75.8 bits (38), Expect = 5e-13
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 388 gattgtggaaacagagcaaagaaagattgcagctacaagagatgcaggacatgttgcaag 447
||||| ||||||||||||||||| ||||| || | || |||||||||||||| |||
Sbjct: 596 gattgcggaaacagagcaaagaaggattgtctctttagaaggtgcaggacatgttgtaag 655
Query: 448 gggcgtggatttgactgcaacactcacgtgaggagcacgtgg 489
||||| || | |||||||||||| ||||||| ||||||||||
Sbjct: 656 gggcgcgggtatgactgcaacacgcacgtgaagagcacgtgg 697
Score = 69.9 bits (35), Expect = 3e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1 atgagcatgttaggctttagagacctagttttcatagctccaaaccc 47
||||||||||||||| | ||||| |||||||||||||||||||||||
Sbjct: 128 atgagcatgttaggcctaagagatctagttttcatagctccaaaccc 174
>gnl|LJGI|BP034103
Length = 233
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 961 gttttccctgcttctgcttgctgagat 987
|||||||||||||||||||||||||||
Sbjct: 233 gttttccctgcttctgcttgctgagat 207
>gnl|LJGI|DC594164 similar to UniRef100_A7QCD6 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 564
Score = 52.0 bits (26), Expect = 7e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 175 caacctcaacctcaacctcaacctca 200
||||||||||||||||||||||||||
Sbjct: 485 caacctcaacctcaacctcaacctca 510
Score = 52.0 bits (26), Expect = 7e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 175 caacctcaacctcaacctcaacctca 200
||||||||||||||||||||||||||
Sbjct: 491 caacctcaacctcaacctcaacctca 516
>gnl|LJGI|TC82758 similar to UniRef100_Q9LTA9 Cluster: CLP protease regulatory
subunit CLPX-like; n=1; Arabidopsis thaliana|Rep: CLP
protease regulatory subunit CLPX-like - Arabidopsis
thaliana (Mouse-ear cress), partial (35%)
Length = 1064
Score = 52.0 bits (26), Expect = 7e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 175 caacctcaacctcaacctcaacctca 200
||||||||||||||||||||||||||
Sbjct: 512 caacctcaacctcaacctcaacctca 537
Score = 52.0 bits (26), Expect = 7e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 175 caacctcaacctcaacctcaacctca 200
||||||||||||||||||||||||||
Sbjct: 518 caacctcaacctcaacctcaacctca 543
Score = 52.0 bits (26), Expect = 7e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 175 caacctcaacctcaacctcaacctca 200
||||||||||||||||||||||||||
Sbjct: 524 caacctcaacctcaacctcaacctca 549
Score = 52.0 bits (26), Expect = 7e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 175 caacctcaacctcaacctcaacctca 200
||||||||||||||||||||||||||
Sbjct: 530 caacctcaacctcaacctcaacctca 555
>gnl|LJGI|TC68024 similar to UniRef100_A7NWI8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 1459
Score = 52.0 bits (26), Expect = 7e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 175 caacctcaacctcaacctcaacctca 200
||||||||||||||||||||||||||
Sbjct: 167 caacctcaacctcaacctcaacctca 192
Score = 52.0 bits (26), Expect = 7e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 175 caacctcaacctcaacctcaacctca 200
||||||||||||||||||||||||||
Sbjct: 173 caacctcaacctcaacctcaacctca 198
Score = 52.0 bits (26), Expect = 7e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 175 caacctcaacctcaacctcaacctca 200
||||||||||||||||||||||||||
Sbjct: 179 caacctcaacctcaacctcaacctca 204
Score = 52.0 bits (26), Expect = 7e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 175 caacctcaacctcaacctcaacctca 200
||||||||||||||||||||||||||
Sbjct: 185 caacctcaacctcaacctcaacctca 210
Score = 52.0 bits (26), Expect = 7e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 175 caacctcaacctcaacctcaacctca 200
||||||||||||||||||||||||||
Sbjct: 191 caacctcaacctcaacctcaacctca 216