Miyakogusa Predicted Gene
- Lj0g3v0258489.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0258489.1 Non Chatacterized Hit- tr|K3Y203|K3Y203_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si008222,38.33,4e-17,RIX1,NULL,CUFF.17000.1
(540 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57812 weakly similar to UniRef100_A8MQA6 Cluster: Unc... 311 2e-84
gnl|LJGI|TC68479 weakly similar to UniRef100_Q0DJE5 Cluster: Os0... 264 5e-70
>gnl|LJGI|TC57812 weakly similar to UniRef100_A8MQA6 Cluster: Uncharacterized protein
At1g30240.1; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At1g30240.1 - Arabidopsis
thaliana (Mouse-ear cress), partial (11%)
Length = 796
Score = 311 bits (157), Expect = 2e-84
Identities = 382/457 (83%), Gaps = 15/457 (3%)
Strand = Plus / Plus
Query: 90 caacccctctgagatctccaaggtcatctctctcgtcaaaacacatgctcttttatctga 149
||||||||||| | | ||||||||||||||||| ||| ||||||| |||||||||||||
Sbjct: 224 caacccctctgcgttatccaaggtcatctctctgatcagaacacattctcttttatctga 283
Query: 150 gtctttcacagaatccatgaaccccgagctagttgaacactggaaatctgctgttacatc 209
||| || |||||||||||| ||||||||| |||||| | |||||||| |||||||||||
Sbjct: 284 gtcctttacagaatccatggcccccgagcttgttgaagaatggaaatccgctgttacatc 343
Query: 210 atggttccaacgtacttggaccctcctttttagc-----gataaatat-tgttgggcagg 263
|||| || |||| | | |||||||||| ||| | || ||| |||||||||||
Sbjct: 344 atgggtcgaacgcattgagaccctccttgagagctccacgctagataaatgttgggcagg 403
Query: 264 tatatctttgctgggggttacttgccaggaatgcagcgctcatcgtttcatagactctta 323
||||||||||||||||||||||||| || ||||||| | |||||||| ||||||||||
Sbjct: 404 tatatctttgctgggggttacttgcgagctgtgcagcgatgatcgtttcgtagactctta 463
Query: 324 ctctatgtggttccataagttgctcacttttctacaggcaccagcagattctcaccgagt 383
|||| ||||||| |||||||| | |||||| ||||||||||||| | | |||
Sbjct: 464 ctcttcgtggttcgataagttgaagaaaaaactacagccaccagcagattcggatctagt 523
Query: 384 gagggtggcttcttgcgcttcaatatctgctctatttgcaaggttaagtggatttcctaa 443
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 524 gagggtggcttgttgcgcttcaatatctgatctatttgcaaggttaagtggatttcctaa 583
Query: 444 gctcaataaatatggagtttcctatgctgtgaaagtcattcagcctgttttgaggatgat 503
|||||| ||| | || || |||||||||| |||||||||||||||||||| |
Sbjct: 584 gctcaagaaaga---------ctgtgttgtgaaagtcgttcagcctgttttgaggatgtt 634
Query: 504 acaagatgagaactcagaggcaatttgggaagctgca 540
||||||||| |||||||||||||||| ||||||||||
Sbjct: 635 acaagatgacaactcagaggcaattttggaagctgca 671
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 30 catgaacgacgttgaactcaagccccgcttgcttgacacccttatcagtgac 81
|||| |||| ||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 143 catggacgatgttgaactcaaaccccgcttgcttcgcacccttatcagtgac 194
>gnl|LJGI|TC68479 weakly similar to UniRef100_Q0DJE5 Cluster: Os05g0295900 protein;
n=1; Oryza sativa Japonica Group|Rep: Os05g0295900
protein - Oryza sativa subsp. japonica (Rice), partial
(5%)
Length = 627
Score = 264 bits (133), Expect = 5e-70
Identities = 308/365 (84%), Gaps = 6/365 (1%)
Strand = Plus / Plus
Query: 90 caacccctctgagatctccaaggtcatctctctcgtcaaaacacatgctcttttatctga 149
||||||||||| | | ||||||||||||||||| ||| ||||||| |||||||||||||
Sbjct: 263 caacccctctgcgttatccaaggtcatctctctgatcagaacacattctcttttatctga 322
Query: 150 gtctttcacagaatccatgaaccccgagctagttgaacactggaaatctgctgttacatc 209
|||||| |||||||||||| ||||||||| |||||| | |||||||| |||||||||||
Sbjct: 323 gtcttttacagaatccatggcccccgagcttgttgaagaatggaaatccgctgttacatc 382
Query: 210 atggttccaacgtacttggaccctcctttttag-----cgataaat-attgttgggcagg 263
|||| || |||| | | |||||||||| || || || || | |||||||||||
Sbjct: 383 atgggtcgaacgcattgagaccctccttgagagctccacgctagataaatgttgggcagg 442
Query: 264 tatatctttgctgggggttacttgccaggaatgcagcgctcatcgtttcatagactctta 323
||||||||||||||||||||||||| || ||||||| | |||||||| ||||||||||
Sbjct: 443 tatatctttgctgggggttacttgcgagctgtgcagcgatgatcgtttcgtagactctta 502
Query: 324 ctctatgtggttccataagttgctcacttttctacaggcaccagcagattctcaccgagt 383
|||| ||||||| |||||||| | |||||| ||||||||||||| | | |||
Sbjct: 503 ctcttcgtggttcgataagttgaagaaaaaactacagccaccagcagattcggatctagt 562
Query: 384 gagggtggcttcttgcgcttcaatatctgctctatttgcaaggttaagtggatttcctaa 443
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 563 gagggtggcttgttgcgcttcaatatctgatctatttgcaaggttaagtggatttcctaa 622
Query: 444 gctca 448
|||||
Sbjct: 623 gctca 627
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 30 catgaacgacgttgaactcaagccccgcttgcttgacacccttatcagtgac 81
|||| |||| ||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 182 catggacgatgttgaactcaaaccccgcttgcttcgcacccttatcagtgac 233