Miyakogusa Predicted Gene
- Lj0g3v0258229.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0258229.1 Non Chatacterized Hit- tr|I3SUR7|I3SUR7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; RING ZINC FINGER PROTEIN,NULL; RING/U-box,NULL;
ZF_RING_2,Zinc finger, RIN,CUFF.16979.1
(883 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63473 1128 0.0
gnl|LJGI|BP072713 291 4e-78
>gnl|LJGI|TC63473
Length = 813
Score = 1128 bits (569), Expect = 0.0
Identities = 587/592 (99%), Gaps = 2/592 (0%)
Strand = Plus / Plus
Query: 1 atgtcaaatagtaggaatactcattggtgtcatagttgcaggaggccagttcgactcgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 atgtcaaatagtaggaatactcattggtgtcatagttgcaggaggccagttcgactcgga 283
Query: 61 tggcgggattcgatttgccgtagctgtaatgaaggatttgttcaagaacttgatgatatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tggcgggattcgatttgccgtagctgtaatgaaggatttgttcaagaacttgatgatatg 343
Query: 121 gtgcctgttaaccctctagacttggttggactggacaacaatgaagaacatggccaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gtgcctgttaaccctctagacttggttggactggacaacaatgaagaacatggccaaagg 403
Query: 181 tttggactcatggaaacattctcaggatttatgaggcatcaaatgggaaatagaagccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tttggactcatggaaacattctcaggatttatgaggcatcaaatgggaaatagaagccat 463
Query: 241 aggcatgacatcagggcacaaccagattcaattcctgaacagggtgcagggtttgctcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aggcatgacatcagggcacaaccagattcaattcctgaacagggtgcagggtttgctcct 523
Query: 301 ttgttgatcttcggtggccaaattcctttcagattgtctggacatggtggcattgaagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ttgttgatcttcggtggccaaattcctttcagattgtctggacatggtggcattgaagct 583
Query: 361 ctcttcaatggggccccaggaattggaatgacacgaggcaacacgggtgattattttatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ctcttcaatggggccccaggaattggaatgacacgaggcaacacgggtgattattttatt 643
Query: 421 ggtcctgggctagaagaaatgtttgaacagctctcaattaacaaccagcaaggcccgcca 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ggccctgggctagaagaaatgtttgaacagctctcaattaacaaccagcaaggcccgcca 703
Query: 481 cccgcatccaggtcctctatagatgcattgcctactatcagaatagtgaagaggcatctt 540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 704 cccgcatccaggtcctctatagatgcactgcctactatcagaatagtgaagaggcatctt 763
Query: 541 cggtcagattcacactgcccaatatgcaaagaaaaatttgagttggggtctg 592
||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 764 cggtcagattcacactgcccaatatgcaa--gaaaatttgagttggggtctg 813
>gnl|LJGI|BP072713
Length = 403
Score = 291 bits (147), Expect = 4e-78
Identities = 180/187 (96%), Gaps = 3/187 (1%)
Strand = Plus / Minus
Query: 700 gtattgagtggctcaaatggtagaagaagtagaagcagtaatgcaaatgaaagggtaagt 759
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 403 gtattgagtggctcaaatggtagaagaagtagaagcagtaacgcaaatgaaagggtaagt 344
Query: 760 agtagggagaaccagggaaggcgaaatcctttttcgttcttgtggcctttccg-ctcttc 818
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 343 agtagggagaaccagggaaggcgaaatcctttttcgttcttgtggcctttccgcctcttc 284
Query: 819 tatttctg-gcagtaataa-tcgtgcaactggaagaacctcaacaacaccaactctctca 876
||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 283 tatttatgtgcagtaataattcgtgcaactggaagaacctcaaccacaccaactctctca 224
Query: 877 caatagt 883
| |||||
Sbjct: 223 ctatagt 217