Miyakogusa Predicted Gene

Lj0g3v0258149.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0258149.1 tr|F2D440|F2D440_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,26.83,0.000000003,seg,NULL,CUFF.16973.1
         (583 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP039207 weakly similar to UniRef100_A7Q7K9 Cluster: Ch...   587   e-167

>gnl|LJGI|BP039207 weakly similar to UniRef100_A7Q7K9 Cluster: Chromosome undetermined
           scaffold_60, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_60, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (10%)
          Length = 476

 Score =  587 bits (296), Expect = e-167
 Identities = 310/317 (97%)
 Strand = Plus / Minus

                                                                       
Query: 267 tccagcaccagatgagaaaccttcagttactaaagcacagnnnnnnnctagagaaagaga 326
           ||||||||||||||||||||||||||||||||||||||||       |||||||||||||
Sbjct: 476 tccagcaccagatgagaaaccttcagttactaaagcacagaaaaaaactagagaaagaga 417

                                                                       
Query: 327 tcatggaacacgtgagaatcataatagcccttttacatggggatttccggtggttaccgc 386
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tcatggaacacgtgagaatcataatagcccttttacatggggatttccggtggttaccgc 357

                                                                       
Query: 387 aatgattgcggtggctacggttcggttacatgaagttgagttaacaactgagttgaaaca 446
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aatgattgcggtggctacggttcggttacatgaagttgagttaacaactgagttgaaaca 297

                                                                       
Query: 447 acatgtgggtggctctttagccgtggaaattgttaacagctcttggttgcagtgtgtact 506
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 acatgtgggtggctctttagccgtggaaattgttaacagctcttggttgcagtgtgtact 237

                                                                       
Query: 507 ggcagcagctacatggtatatgattggattggcagttgtagaacttgtggcactcattgg 566
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 ggcagcagctacatggtatatgattggattggcagttgtagaacttgtggcactcattgg 177

                            
Query: 567 aaatagaactagataga 583
           |||||||||||||||||
Sbjct: 176 aaatagaactagataga 160