Miyakogusa Predicted Gene

Lj0g3v0258139.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0258139.1 Non Chatacterized Hit- tr|I1NCX1|I1NCX1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.22,0,DnaJ
molecular chaperone homology domain,Heat shock protein DnaJ,
N-terminal; DnaJ,Heat shock protei,CUFF.16976.1
         (1434 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP039207 weakly similar to UniRef100_A7Q7K9 Cluster: Ch...   591   e-168

>gnl|LJGI|BP039207 weakly similar to UniRef100_A7Q7K9 Cluster: Chromosome undetermined
            scaffold_60, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_60, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (10%)
          Length = 476

 Score =  591 bits (298), Expect = e-168
 Identities = 312/319 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1116 tccagcaccagatgagaaaccttcagttactaaagcacagnnnnnnnctagagaaagaga 1175
            ||||||||||||||||||||||||||||||||||||||||       |||||||||||||
Sbjct: 476  tccagcaccagatgagaaaccttcagttactaaagcacagaaaaaaactagagaaagaga 417

                                                                        
Query: 1176 tcatggaacacgtgagaatcataatagcccttttacatggggatttccggtggttaccgc 1235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416  tcatggaacacgtgagaatcataatagcccttttacatggggatttccggtggttaccgc 357

                                                                        
Query: 1236 aatgattgcggtggctacggttcggttacatgaagttgagttaacaactgagttgaaaca 1295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356  aatgattgcggtggctacggttcggttacatgaagttgagttaacaactgagttgaaaca 297

                                                                        
Query: 1296 acatgtgggtggctctttagccgtggaaattgttaacagctcttggttgcagtgtgtact 1355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296  acatgtgggtggctctttagccgtggaaattgttaacagctcttggttgcagtgtgtact 237

                                                                        
Query: 1356 ggcagcagctacatggtatatgattggattggcagttgtagaacttgtggcactcattgg 1415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236  ggcagcagctacatggtatatgattggattggcagttgtagaacttgtggcactcattgg 177

                               
Query: 1416 aaatagaactagatagaag 1434
            |||||||||||||||||||
Sbjct: 176  aaatagaactagatagaag 158