Miyakogusa Predicted Gene
- Lj0g3v0257769.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0257769.2 Non Chatacterized Hit- tr|I3S057|I3S057_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.55,0,seg,NULL;
NAC,Nascent polypeptide-associated complex NAC;
UBA,Ubiquitin-associated/translation elong,CUFF.16952.2
(666 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63506 similar to UniRef100_Q94JX9 Cluster: Nascent po... 531 e-150
gnl|LJGI|TC63070 homologue to UniRef100_A7QEU5 Cluster: Chromoso... 505 e-142
gnl|LJGI|CB826779 similar to UniRef100_Q94JX9 Cluster: Nascent p... 309 1e-83
>gnl|LJGI|TC63506 similar to UniRef100_Q94JX9 Cluster: Nascent polypeptide-associated
complex subunit alpha-like protein 2; n=1; Arabidopsis
thaliana|Rep: Nascent polypeptide-associated complex
subunit alpha-like protein 2 - Arabidopsis thaliana
(Mouse-ear cress), partial (75%)
Length = 1083
Score = 531 bits (268), Expect = e-150
Identities = 417/470 (88%), Gaps = 6/470 (1%)
Strand = Plus / Plus
Query: 197 ctgagggttcaaagcagagcagaagtgagnnnnnnngccgaaaagcaatgttgaagcttg 256
|||||||||||||||| |||||||||||| | ||||||||||||||||||||||
Sbjct: 322 ctgagggttcaaagcaaagcagaagtgagaagaagagtcgaaaagcaatgttgaagcttg 381
Query: 257 ggctgaagcctgtcactggcgttagtagggtcacaatcaagagaacaaaaaatatacnnn 316
| ||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 382 gactgaaacctgtgactggcgtcagtagggtcacaatcaagagaacaaaaaatattcttt 441
Query: 317 nnnncatctcaaaacctgatgtctttaagagtccgaattctgagacatatgtcatattcg 376
||||||||||||||||||||| |||||||| ||||| ||||| || ||||||||||
Sbjct: 442 ttttcatctcaaaacctgatgtcttcaagagtccaaattccgagacctacgtcatattcg 501
Query: 377 gggaggcgaaaatagaggacctgagctcgcagttgcagacgcaagctgctcagcagttca 436
|||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 502 gggaggcgaaaatagaggacctgagctctcagctgcagacacaagctgctcagcagttca 561
Query: 437 gaatgccagatatggcatctgtaatggcaaaacaagatcaaggcgctgctgcagctgatg 496
| ||||||||||||| |||||| |||||||||||||||||||| | ||||||||||||
Sbjct: 562 ggatgccagatatgggatctgtgatggcaaaacaagatcaagg---tactgcagctgatg 618
Query: 497 gagcacagcctgaggaagaagaagaggaggttgatgaaaccggcgtggagccccacgaca 556
||| ||||||||| ||||||||||||||||||||||| || |||||||| || ||||
Sbjct: 619 gagggcagcctgag---gaagaagaggaggttgatgaaactggtgtggagccgcatgaca 675
Query: 557 ttgacttggtcatgacacaagctggagtgtcaagaagcaaggctgtcaaggctctcaaga 616
|||| ||||||||||||||||| |||||||| || ||||||| || |||||||||||||
Sbjct: 676 ttgatttggtcatgacacaagcaggagtgtccaggggcaaggccgtgaaggctctcaaga 735
Query: 617 ctcacaatggggacattgttggtgccatcatggagctcactacttaattg 666
|||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 736 ctcacaatggggacattgttggtgccatcatggaactcactacttaattg 785
>gnl|LJGI|TC63070 homologue to UniRef100_A7QEU5 Cluster: Chromosome chr16
scaffold_86, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_86, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (98%)
Length = 676
Score = 505 bits (255), Expect = e-142
Identities = 387/432 (89%), Gaps = 6/432 (1%)
Strand = Plus / Plus
Query: 235 cgaaaagcaatgttgaagcttgggctgaagcctgtcactggcgttagtagggtcacaatc 294
||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||
Sbjct: 165 cgaaaagcaatgttgaagcttggactgaaacctgtgactggcgtcagtagggtcacaatc 224
Query: 295 aagagaacaaaaaatatacnnnnnnncatctcaaaacctgatgtctttaagagtccgaat 354
||||||||||||||||| | ||||||||||||||||||| | |||||||| |||
Sbjct: 225 aagagaacaaaaaatattctttttttcatctcaaaacctgatgtcctcaagagtccaaat 284
Query: 355 tctgagacatatgtcatattcggggaggcgaaaatagaggacctgagctcgcagttgcag 414
|| ||||| || |||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 285 tccgagacctacgtcatattcggggaggcgaaaatagaggacctgagctctcagctgcag 344
Query: 415 acgcaagctgctcagcagttcagaatgccagatatggcatctgtaatggcaaaacaagat 474
|| |||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||
Sbjct: 345 acacaagctgctcagcagttcaggatgccagatatgggatctgtgatggcaaaacaagat 404
Query: 475 caaggcgctgctgcagctgatggagcacagcctgaggaagaagaagaggaggttgatgaa 534
||||| | ||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 405 caagg---tactgcagctgatggagggcagcctgag---gaagaagaggaggttgatgaa 458
Query: 535 accggcgtggagccccacgacattgacttggtcatgacacaagctggagtgtcaagaagc 594
|| || |||||||| || |||||||| ||||||||||||||||| |||||||| || ||
Sbjct: 459 actggtgtggagccgcatgacattgatttggtcatgacacaagcaggagtgtccaggggc 518
Query: 595 aaggctgtcaaggctctcaagactcacaatggggacattgttggtgccatcatggagctc 654
||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 519 aaggccgtgaaggctctcaagactcacaatggggacattgttggtgccatcatggaactc 578
Query: 655 actacttaattg 666
||||||||||||
Sbjct: 579 actacttaattg 590
>gnl|LJGI|CB826779 similar to UniRef100_Q94JX9 Cluster: Nascent polypeptide-associated
complex subunit alpha-like protein 2; n=1; Arabidopsis
thaliana|Rep: Nascent polypeptide-associated complex
subunit alpha-like protein 2 - Arabidopsis thaliana
(Mouse-ear cress), partial (35%)
Length = 445
Score = 309 bits (156), Expect = 1e-83
Identities = 184/198 (92%)
Strand = Plus / Plus
Query: 182 gtgctcaaggtaccactgagggttcaaagcagagcagaagtgagnnnnnnngccgaaaag 241
|||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 248 gtgctcaaggtaccactgagggttcaaagcagagcagaagtgagaaaaaaagccgaaaag 307
Query: 242 caatgttgaagcttgggctgaagcctgtcactggcgttagtagggtcacaatcaagagaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 caatgttgaagcttgggctgaagcctgtcactggcgttagtagggtcacaatcaagagaa 367
Query: 302 caaaaaatatacnnnnnnncatctcaaaacctgatgtctttaagagtccgaattctgaga 361
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 caaaaaatatactttttttcatctcaaaacctgatgtctttaagagtccgaattctgaga 427
Query: 362 catatgtcatattcgggg 379
||||||||||||||||||
Sbjct: 428 catatgtcatattcgggg 445
Score = 230 bits (116), Expect = 9e-60
Identities = 122/124 (98%)
Strand = Plus / Plus
Query: 1 atgtctccaggtaccgttctcgacgcttcctccgacgaccaccaacaacttccctccgcc 60
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 atgtctccaggtactgttttcgacgcttcctccgacgaccaccaacaacttccctccgcc 126
Query: 61 accgacgacaagaagaaacctcaaccgcaggagtacgatgatgctcctgttgttgaggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 accgacgacaagaagaaacctcaaccgcaggagtacgatgatgctcctgttgttgaggac 186
Query: 121 gtgc 124
||||
Sbjct: 187 gtgc 190