Miyakogusa Predicted Gene

Lj0g3v0257719.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0257719.1 Non Chatacterized Hit- tr|H2M5X2|H2M5X2_ORYLA
Uncharacterized protein OS=Oryzias latipes GN=MBD4
PE=,37.32,5e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; 5-METHYLCYTOSINE
G/T MISMATCH-SPECIFIC DNA GLYCOSYLASE,NULL; HhH,CUFF.16947.1
         (627 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58046 similar to UniRef100_A7R238 Cluster: Chromosome...    80   2e-14

>gnl|LJGI|TC58046 similar to UniRef100_A7R238 Cluster: Chromosome undetermined
            scaffold_397, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_397, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (33%)
          Length = 1465

 Score = 79.8 bits (40), Expect = 2e-14
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                        
Query: 488  ttggcaagtatgcagctgatgcatatgctatattctgtacgggtaaatggcagcgagtga 547
            ||||||||||||| |||||||||||||| ||||| |||||||| |||||| | |||||||
Sbjct: 1022 ttggcaagtatgctgctgatgcatatgccatattttgtacgggaaaatgggatcgagtga 1081

                
Query: 548  cacc 551
            ||||
Sbjct: 1082 cacc 1085