Miyakogusa Predicted Gene

Lj0g3v0257619.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0257619.1 Non Chatacterized Hit- tr|B9RGK0|B9RGK0_RICCO
WD-repeat protein, putative OS=Ricinus communis GN=RCO,34.71,6e-19,WD
REPEAT PROTEIN 26-RELATED,NULL; C-terminal to LisH motif.,CTLH,
C-terminal LisH motif; LISH,LisH ,CUFF.16948.1
         (520 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73205 weakly similar to UniRef100_A7Q1I0 Cluster: Chr...   920   0.0  

>gnl|LJGI|TC73205 weakly similar to UniRef100_A7Q1I0 Cluster: Chromosome chr7
           scaffold_44, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr7 scaffold_44, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (21%)
          Length = 670

 Score =  920 bits (464), Expect = 0.0
 Identities = 464/464 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatggagagtaatcattctgaggtgcttattggttcaaaagcgttgtttaaaaaacat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atgatggagagtaatcattctgaggtgcttattggttcaaaagcgttgtttaaaaaacat 266

                                                                       
Query: 61  gaatttgtgaggattatagttcagtgtctgtattcattagggtacagcaagtctgcatct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gaatttgtgaggattatagttcagtgtctgtattcattagggtacagcaagtctgcatct 326

                                                                       
Query: 121 tgtttggaagttgaatctggggttttgttcaagtccaaggagtttcagttgcttgaatcg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgtttggaagttgaatctggggttttgttcaagtccaaggagtttcagttgcttgaatcg 386

                                                                       
Query: 181 catgttttgaatgggaattgggatggttgcattggttttcttaattccatgagggatatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 catgttttgaatgggaattgggatggttgcattggttttcttaattccatgagggatatt 446

                                                                       
Query: 241 atgggtgaagctgtggagtctgctctgtttcttgtcctgaggcagtgtcttatggagtat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atgggtgaagctgtggagtctgctctgtttcttgtcctgaggcagtgtcttatggagtat 506

                                                                       
Query: 301 ataaagcatggtgaggtaactttggccttggatgtgttgaggaaacgagtttccgcgttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ataaagcatggtgaggtaactttggccttggatgtgttgaggaaacgagtttccgcgttg 566

                                                                       
Query: 361 catttggaccgttacaaggttcacagcctggctaatagtatgctttccttgaaggatacc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 catttggaccgttacaaggttcacagcctggctaatagtatgctttccttgaaggatacc 626

                                                       
Query: 421 gagattggtggcgccgtggatggtgatgctgttcgtgatttgcg 464
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gagattggtggcgccgtggatggtgatgctgttcgtgatttgcg 670