Miyakogusa Predicted Gene

Lj0g3v0257549.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0257549.2 tr|G7IHZ6|G7IHZ6_MEDTR MMS19 nucleotide excision
repair protein-like protein OS=Medicago truncatula
,75,0,MMS19_N,Transcription protein MMS19, N-terminal; no
description,Armadillo-like helical; ARM repeat,A,CUFF.16960.2
         (1539 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC593658 weakly similar to UniRef100_A7P731 Cluster: Ch...   605   e-172

>gnl|LJGI|DC593658 weakly similar to UniRef100_A7P731 Cluster: Chromosome chr9
           scaffold_7, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 321

 Score =  605 bits (305), Expect = e-172
 Identities = 317/321 (98%)
 Strand = Plus / Plus

                                                                       
Query: 598 tatcctgaaccatctggtctacttggaagctttgctacagatatttttgctattttagaa 657
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tatcctgaaccatctggtctacttggaagctttgctacagatatttttgctattttagaa 60

                                                                       
Query: 658 gcttactttcccattcactttacacatccaaacagtggggatattcatattcaaagagat 717
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcttactttcccattcactttacacatccaaacagtggggatattcatattcaaagagat 120

                                                                       
Query: 718 gacctgtcaagggctctgatgtctgcattctcttctacacctctttttgaaccatttgtc 777
           ||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||
Sbjct: 121 gacctgtcaagggctctgatgtctgcattcggggctacacctctttttgaaccatttgtc 180

                                                                       
Query: 778 attcctctgcttcttgagaaactttcttcttcactacattcagcaaagattgattcctta 837
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attcctctgcttcttgagaaactttcttcttcactacattcagcaaagattgattcctta 240

                                                                       
Query: 838 aaatatcttagagagtgctcgtctaagtatggagctgagagaatatcaaaatatgctaag 897
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaatatcttagagagtgctcgtctaagtatggagctgagagaatatcaaaatatgctaag 300

                                
Query: 898 gctatttggtcttcattaaaa 918
           |||||||||||||||||||||
Sbjct: 301 gctatttggtcttcattaaaa 321