Miyakogusa Predicted Gene
- Lj0g3v0257189.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0257189.1 Non Chatacterized Hit- tr|Q9ARL7|Q9ARL7_HORVD
Putative serine/threonine kinase OS=Hordeum vulgare va,75.41,3e-19,
,CUFF.16901.1
(238 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV771507 similar to UniRef100_A7P2E2 Cluster: Chromosom... 335 7e-92
gnl|LJGI|TC60750 similar to UniRef100_A7P2E2 Cluster: Chromosome... 270 3e-72
gnl|LJGI|AV775101 76 1e-13
>gnl|LJGI|AV771507 similar to UniRef100_A7P2E2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 480
Score = 335 bits (169), Expect = 7e-92
Identities = 220/236 (93%), Gaps = 2/236 (0%)
Strand = Plus / Plus
Query: 1 atggattcttcaatccaaaa--cagtgctacaatggtaccagcacaggtgccaaatgaga 58
|||||||||||||||||| | ||||||||||| ||||||||| ||||||||||||||||
Sbjct: 211 atggattcttcaatccaagaagcagtgctacaagggtaccagcgcaggtgccaaatgaga 270
Query: 59 tacaacttcctccaagcatttaccaaagattgacatcaagttctactctaatgaacttgg 118
||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||| ||
Sbjct: 271 tacaacttcctccaagcatttaccagagatggacattaagttctactctaatgaactggg 330
Query: 119 cacaggaattagcttaccataaaatgtgttatgaagatatgccattgcaagagttgcaag 178
|||||| ||| ||||||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 331 cacaggctttaccttaccataaaatgtattatgaagatatgccatggcaagagtggcaag 390
Query: 179 caacccaggaacagcggactatccaaaatctcttggacacacttcggaccattctt 234
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 391 caacccaggaacagcggactatccaaaatctctgggacacacttcggaccattctt 446
>gnl|LJGI|TC60750 similar to UniRef100_A7P2E2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 746
Score = 270 bits (136), Expect = 3e-72
Identities = 169/180 (93%)
Strand = Plus / Plus
Query: 52 aatgagatacaacttcctccaagcatttaccaaagattgacatcaagttctactctaatg 111
|||||||| | ||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 282 aatgagatgccacttcctccaagcatttaccaaagattgacatcgagttttactctaatg 341
Query: 112 aacttggcacaggaattagcttaccataaaatgtgttatgaagatatgccattgcaagag 171
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aacttggcacaggctttagcttaccataaaatgtgttatgaagatatgccattgcaagag 401
Query: 172 ttgcaagcaacccaggaacagcggactatccaaaatctcttggacacacttcggaccatt 231
||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||
Sbjct: 402 ctgcaagcaacccaggaacagcggactatccaaaatttttcagacacacttcggaccatt 461
>gnl|LJGI|AV775101
Length = 402
Score = 75.8 bits (38), Expect = 1e-13
Identities = 93/109 (85%), Gaps = 3/109 (2%)
Strand = Plus / Minus
Query: 127 ttagcttaccataaaatgtgttatgaagatatgccattgcaagagttgcaagcaaccc-- 184
||||||||||||||| ||||||||||||||| |||||| | |||| ||| ||||||||
Sbjct: 399 ttagcttaccataaactgtgttatgaagataagccattcccagagctgc-agcaacccca 341
Query: 185 aggaacagcggactatccaaaatctcttggacacacttcggaccattct 233
||| | ||||||||||| || ||||| ||||||||||||||| ||||
Sbjct: 340 cggacccgcggactatcccaactctctcagacacacttcggacccttct 292