Miyakogusa Predicted Gene

Lj0g3v0256709.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0256709.2 Non Chatacterized Hit- tr|J3MA83|J3MA83_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G3,80.95,0.000000000003,seg,NULL,CUFF.16869.2
         (429 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75343 similar to UniRef100_A7P2L3 Cluster: Chromosome...   204   3e-52
gnl|LJGI|TC82539 similar to UniRef100_A7P2L3 Cluster: Chromosome...    98   5e-20
gnl|LJGI|TC69377 similar to UniRef100_A7P2L3 Cluster: Chromosome...    92   3e-18
gnl|LJGI|TC74549 similar to UniRef100_P52904 Cluster: Pyruvate d...    86   2e-16
gnl|LJGI|TC73465 homologue to UniRef100_A7QUS8 Cluster: Chromoso...    86   2e-16
gnl|LJGI|TC72010 weakly similar to UniRef100_A7PNT3 Cluster: Chr...    84   8e-16

>gnl|LJGI|TC75343 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 1178

 Score =  204 bits (103), Expect = 3e-52
 Identities = 121/127 (95%)
 Strand = Plus / Plus

                                                                       
Query: 51  ggttataatggaaattcctcttgaattgatgctaaccataagcaagaagctaccgtggat 110
           ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 580 ggttataatagaaattcctcttgaattgatgctaaccataagcaagatgctactgtggat 639

                                                                       
Query: 111 gtttttccctgatataattcccattggtcatccaatatttgatattatcaacccggcaaa 170
           | |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 640 gcttttccctgatataattcccattggtcatccaatatttgatattatcaactcgacaaa 699

                  
Query: 171 tccagag 177
           |||||||
Sbjct: 700 tccagag 706


>gnl|LJGI|TC82539 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 734

 Score = 97.6 bits (49), Expect = 5e-20
 Identities = 52/53 (98%)
 Strand = Plus / Plus

                                                                
Query: 2   tgttggagaagtatgtccctgagagggttcttgatactccaatcattgaggtt 54
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 162 tgttggagaagtatgtccctgagagggttcttgatactccaatcactgaggtt 214


>gnl|LJGI|TC69377 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 993

 Score = 91.7 bits (46), Expect = 3e-18
 Identities = 49/50 (98%)
 Strand = Plus / Plus

                                                             
Query: 2   tgttggagaagtatgtccctgagagggttcttgatactccaatcattgag 51
           ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 170 tgttggagaagtatgtccctgagagggttcttgatactccaatcactgag 219


>gnl|LJGI|TC74549 similar to UniRef100_P52904 Cluster: Pyruvate dehydrogenase E1
           component subunit beta, mitochondrial precursor; n=1;
           Pisum sativum|Rep: Pyruvate dehydrogenase E1 component
           subunit beta, mitochondrial precursor - Pisum sativum
           (Garden pea), partial (35%)
          Length = 643

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                              
Query: 2   tgttggagaagtatgtccctgagagggttcttgatactccaatcattgagg 52
           ||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 450 tgttggagaagtatggccctgagagggttcttgatactccaatcactgagg 500


>gnl|LJGI|TC73465 homologue to UniRef100_A7QUS8 Cluster: Chromosome chr1
           scaffold_180, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_180, whole genome
           shotgun sequence - Vitis vinifera (Grape), complete
          Length = 1651

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                              
Query: 2   tgttggagaagtatgtccctgagagggttcttgatactccaatcattgagg 52
           ||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 394 tgttggagaagtatggccctgagagggttcttgatactccaatcactgagg 444


>gnl|LJGI|TC72010 weakly similar to UniRef100_A7PNT3 Cluster: Chromosome chr8
           scaffold_23, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 1231

 Score = 83.8 bits (42), Expect = 8e-16
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                             
Query: 2   tgttggagaagtatgtccctgagagggttcttgatactccaatcattgag 51
           ||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 141 tgttggagaagtatggccctgagagggttcttgatactccaatcactgag 190