Miyakogusa Predicted Gene
- Lj0g3v0256399.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0256399.1 tr|G7K4N2|G7K4N2_MEDTR Pectinesterase OS=Medicago
truncatula GN=MTR_5g095490 PE=3
SV=1,83.33,0,Pectinesterase,Pectinesterase, catalytic; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no descri,CUFF.16845.1
(453 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO015023 weakly similar to UniRef100_A9STS3 Cluster: Pr... 739 0.0
gnl|LJGI|TC76166 94 9e-19
>gnl|LJGI|GO015023 weakly similar to UniRef100_A9STS3 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(41%)
Length = 880
Score = 739 bits (373), Expect = 0.0
Identities = 430/453 (94%)
Strand = Plus / Minus
Query: 1 atgcaagcagtggcactaagagtagacagtgatagagccatgttctatggagttaagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 atgcaagcagtggcactaagagtagacagtgatagagccatgttctatggagttaagatt 645
Query: 61 aagggaacacaggacactcttttagacagcacaggaacccattacttctacaagtgtctc 120
|||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||
Sbjct: 644 aagggaacacaggacactcttttagacaacacatgaacccattacttctaccagtgtctc 585
Query: 121 atccaaggcaaagttgatttcatctttggtagtgcaaaatcactatatgagaactgtcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 584 atccaaggcaaagttgatttcatctttggtagtgcaaaatcactatatgagaattgtcgt 525
Query: 181 attgagtcaatagctgagaactacggagccattgcagcgcatcacagggattcgccacat 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 524 attgagtcaatagctgagaactacggagccatttcagcgcatcacagggattcaccacat 465
Query: 241 gaggatacaggnnnnnnnnnnnnagggtgtagcattggaggaagtggtggcaatgtgtac 300
||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 464 gaggatacaagcttttcttttgtagggtgtagcattggaggaagtggtggcaatgtgtac 405
Query: 301 cttgggagagcatggggggaatactcaagaataatatactcaaattgcaacatggataat 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 cttgagagagcatggggggaatactcaagaataatatactcaaattgcaacatggataat 345
Query: 361 attattaatcctcaaggatggtctgaatggaatcatccagaaagaaagaagactgcagtt 420
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 344 attattaatcctcaaggatgatctgaatggaatcatcctgaaagaaagaagactgcagtg 285
Query: 421 tttggtgagtatcagtgtcatggaagaggagca 453
|||||||||||||||||||||||||||||||||
Sbjct: 284 tttggtgagtatcagtgtcatggaagaggagca 252
>gnl|LJGI|TC76166
Length = 733
Score = 93.7 bits (47), Expect = 9e-19
Identities = 54/55 (98%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 1 atgcaagcagtggcactaagagtagacagtgatagagccatgttctatggagtta 55
||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 676 atgcaagcagtggcactaagagtagacagtgatagagcc-tgttctatggagtta 729