Miyakogusa Predicted Gene
- Lj0g3v0255929.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0255929.1 Non Chatacterized Hit- tr|I1N002|I1N002_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.82,0,seg,NULL;
ATPases associated with a variety of cellula,AAA+ ATPase domain; no
description,NULL; P-lo,CUFF.16802.1
(2001 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP029778 similar to UniRef100_Q7PC88 Cluster: Probable ... 841 0.0
gnl|LJGI|DC598342 homologue to UniRef100_A7P745 Cluster: Chromos... 133 5e-30
gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome... 80 6e-14
gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosom... 66 9e-10
gnl|LJGI|TC69451 similar to UniRef100_A7PRJ5 Cluster: Chromosome... 64 4e-09
>gnl|LJGI|BP029778 similar to UniRef100_Q7PC88 Cluster: Probable pleiotropic drug
resistance protein 3; n=1; Arabidopsis thaliana|Rep:
Probable pleiotropic drug resistance protein 3 -
Arabidopsis thaliana (Mouse-ear cress), partial (9%)
Length = 424
Score = 841 bits (424), Expect = 0.0
Identities = 424/424 (100%)
Strand = Plus / Minus
Query: 102 tgaatcaacaaaaagttcaaaatctaatggcggagaccacaaaaacaagggaatgattct 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgaatcaacaaaaagttcaaaatctaatggcggagaccacaaaaacaagggaatgattct 365
Query: 162 tccgtttcaacaatttacggtgacattccacaatgtcaattactatgttgatatgccaca 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tccgtttcaacaatttacggtgacattccacaatgtcaattactatgttgatatgccaca 305
Query: 222 agagataaggaaacaaggcataatagaaacgaagttgaaactcttgtcaaatgttagtgg 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 agagataaggaaacaaggcataatagaaacgaagttgaaactcttgtcaaatgttagtgg 245
Query: 282 ggtttttgcaccaggtgtactaacagcattaatggggtcaagtggagctggaaagacaac 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ggtttttgcaccaggtgtactaacagcattaatggggtcaagtggagctggaaagacaac 185
Query: 342 tttaatggatgttcttgctggaagaaaaactggaggatatattgagggtgatattaaaat 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tttaatggatgttcttgctggaagaaaaactggaggatatattgagggtgatattaaaat 125
Query: 402 atctggttatccaaaagtacaacacacatttgccagagtagcaggatatgttgaacaaaa 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atctggttatccaaaagtacaacacacatttgccagagtagcaggatatgttgaacaaaa 65
Query: 462 tgacatacattctcctcaagtcacagttgaggagtccctgttgttttctgcattattaag 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tgacatacattctcctcaagtcacagttgaggagtccctgttgttttctgcattattaag 5
Query: 522 gctt 525
||||
Sbjct: 4 gctt 1
>gnl|LJGI|DC598342 homologue to UniRef100_A7P745 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 553
Score = 133 bits (67), Expect = 5e-30
Identities = 172/207 (83%)
Strand = Plus / Plus
Query: 640 tcaacggagcaaagaaagcgattgacaattgcggtggagcttgtagcaaatccttccata 699
||||| || ||||||||| | ||||||| || ||||||||||| || |||||||| ||
Sbjct: 237 tcaactgaacaaagaaagaggctgacaatcgctgtggagcttgtcgcgaatccttcaatc 296
Query: 700 attttcatggatgaaccaacatctggactcgatgcgcgcgcagcagccattgtaatgaga 759
|||||||||||||||||||| || || |||||||| | |||||||||||||| |||||
Sbjct: 297 attttcatggatgaaccaacttcaggcctcgatgcaagagcagcagccattgttatgagg 356
Query: 760 actattcgcaatacagttgactctggaagaacagtggtttgcaccatacaccaaccgagt 819
|| | | || || |||||| ||||||| ||||| || ||||| || |||||||| |||
Sbjct: 357 acagtgagaaacactgttgacactggaaggacagttgtctgcacaattcaccaacctagt 416
Query: 820 attgatatatttgaagcatttgatgag 846
|||||||| |||||||| |||||||||
Sbjct: 417 attgatatctttgaagcctttgatgag 443
>gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome undetermined
scaffold_3238, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3238,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (51%)
Length = 715
Score = 79.8 bits (40), Expect = 6e-14
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 784 ggaagaacagtggtttgcaccatacaccaaccgagtattgatatatttgaagcatttgat 843
||||||||||| || |||||||| |||||||| || ||||| || |||||||| ||||||
Sbjct: 35 ggaagaacagttgtatgcaccatccaccaacctagcattgacatttttgaagcttttgat 94
Query: 844 gagttactccttatgaagcatggaggac 871
||| || |||| ||||||| ||||||||
Sbjct: 95 gagctattcctaatgaagcgtggaggac 122
>gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 461
Score = 65.9 bits (33), Expect = 9e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 782 ctggaagaacagtggtttgcaccatacaccaaccgagtattgatatatttgaagcatttg 841
||||||||||||| |||||||| || ||||| || || |||||||| |||||||| ||||
Sbjct: 86 ctggaagaacagttgtttgcacgattcaccagcctagcattgatatctttgaagcctttg 145
Query: 842 atgag 846
|||||
Sbjct: 146 atgag 150
>gnl|LJGI|TC69451 similar to UniRef100_A7PRJ5 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 1481
Score = 63.9 bits (32), Expect = 4e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 799 tgcaccatacaccaaccgagtattgatatatttgaagcatttgatgag 846
||||| || |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 167 tgcactattcaccaaccaagtattgatatatttgaggcatttgatgag 214