Miyakogusa Predicted Gene

Lj0g3v0255739.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0255739.1 Non Chatacterized Hit- tr|I3TA50|I3TA50_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,100,4e-28,
,CUFF.16824.1
         (199 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68287 similar to UniRef100_A7Q2B3 Cluster: Chromosome...   369   e-102

>gnl|LJGI|TC68287 similar to UniRef100_A7Q2B3 Cluster: Chromosome chr13 scaffold_45,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_45, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 556

 Score =  369 bits (186), Expect = e-102
 Identities = 198/201 (98%), Gaps = 2/201 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgcggaagaagcgagagagag--cgagtctgatgcgaggaaaggcactgaaggagaaga 58
           ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 375 atgcggaagaagcgagagagagagcgagtctgatgcgaggaaaggcactgaaggagaaga 316

                                                                       
Query: 59  gggaggagtctcgtagaaaattctggatggtttggacgaagaggttgaagctccgtattg 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gggaggagtctcgtagaaaattctggatggtttggacgaagaggttgaagctccgtattg 256

                                                                       
Query: 119 gcggaatgtacaaggtgagtggcacggcggagaaagccacagcaaacatcagttgcagca 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 255 gcggaatgtacaaggtgagtggcacggcggagaaagccacagcaaacatcagttgcaaca 196

                                
Query: 179 tattcttttttgtcttgtgac 199
           |||||||||||||||||||||
Sbjct: 195 tattcttttttgtcttgtgac 175