Miyakogusa Predicted Gene
- Lj0g3v0255699.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0255699.1 tr|G7KTL0|G7KTL0_MEDTR DNA-binding protein
SMUBP-2 OS=Medicago truncatula GN=MTR_7g092200 PE=4
SV=1,92.05,0,AAA_12,NULL; SUBFAMILY NOT NAMED,NULL; DNA2/NAM7 HELICASE
FAMILY,NULL; no description,NULL; P-loop c,CUFF.16787.1
(534 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80346 similar to UniRef100_A7PWB9 Cluster: Chromosome... 1059 0.0
gnl|LJGI|BW598303 similar to UniRef100_A7PWB9 Cluster: Chromosom... 276 1e-73
>gnl|LJGI|TC80346 similar to UniRef100_A7PWB9 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 1129
Score = 1059 bits (534), Expect = 0.0
Identities = 534/534 (100%)
Strand = Plus / Plus
Query: 1 atgctgtatgatcttgaggatgtgaagaggacatcttcaactgaacctacgctgcttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atgctgtatgatcttgaggatgtgaagaggacatcttcaactgaacctacgctgcttctc 331
Query: 61 atagacatagctggatgcgatatggaagagaagaaagatgaagaagaaagcacacttaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 atagacatagctggatgcgatatggaagagaagaaagatgaagaagaaagcacacttaat 391
Query: 121 gaaggtgaagctgaggttgctatggcttatgcaaagagattagtgcaaagcggggtgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gaaggtgaagctgaggttgctatggcttatgcaaagagattagtgcaaagcggggtgctt 451
Query: 181 ccatctgatattggaattattaccccatatgcagcccaggttgttttgctcaggatgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ccatctgatattggaattattaccccatatgcagcccaggttgttttgctcaggatgttg 511
Query: 241 agaaacaaggaggaccggctgaaggatgttgaaatctcaacagttgatggcttccaaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 agaaacaaggaggaccggctgaaggatgttgaaatctcaacagttgatggcttccaaggg 571
Query: 301 agggagaaggaggccattattatatcaatggttagatcaaattcaaaaaatgaggtgggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 agggagaaggaggccattattatatcaatggttagatcaaattcaaaaaatgaggtgggc 631
Query: 361 tttctgagtgatcgtcggcgaatgaatgtcgctgtgacacgggcaagaaggcaatgctgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tttctgagtgatcgtcggcgaatgaatgtcgctgtgacacgggcaagaaggcaatgctgt 691
Query: 421 cttgtctgtgatactgagacagtcagcagtgatggctttctaaagcgattgattgagtat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 cttgtctgtgatactgagacagtcagcagtgatggctttctaaagcgattgattgagtat 751
Query: 481 tttgaagagcacgctgaatatcagagtgcatcggagtaccagaatgagtaggcg 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tttgaagagcacgctgaatatcagagtgcatcggagtaccagaatgagtaggcg 805
>gnl|LJGI|BW598303 similar to UniRef100_A7PWB9 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 472
Score = 276 bits (139), Expect = 1e-73
Identities = 142/143 (99%)
Strand = Plus / Plus
Query: 1 atgctgtatgatcttgaggatgtgaagaggacatcttcaactgaacctacgctgcttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atgctgtatgatcttgaggatgtgaagaggacatcttcaactgaacctacgctgcttctc 389
Query: 61 atagacatagctggatgcgatatggaagagaagaaagatgaagaagaaagcacacttaat 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 390 atagacatagctggatgcgatatggaagagaagaaagatgaagatgaaagcacacttaat 449
Query: 121 gaaggtgaagctgaggttgctat 143
|||||||||||||||||||||||
Sbjct: 450 gaaggtgaagctgaggttgctat 472