Miyakogusa Predicted Gene
- Lj0g3v0254669.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0254669.1 Non Chatacterized Hit- tr|C0PM82|C0PM82_MAIZE
Uncharacterized protein OS=Zea mays PE=4 SV=1,45,2.5, ,CUFF.16716.1
(369 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO039222 similar to UniRef100_A4Q9A0 Cluster: Abscisic ... 724 0.0
gnl|LJGI|CN825208 homologue to UniRef100_A4Q9A0 Cluster: Abscisi... 557 e-158
gnl|LJGI|TC72759 similar to UniRef100_A4Q9A0 Cluster: Abscisic i... 541 e-153
gnl|LJGI|TC71104 similar to UniRef100_A4Q9A0 Cluster: Abscisic i... 123 8e-28
>gnl|LJGI|GO039222 similar to UniRef100_A4Q9A0 Cluster: Abscisic insensitive 1B; n=1;
Populus tremula|Rep: Abscisic insensitive 1B - Populus
tremula (European aspen), partial (20%)
Length = 455
Score = 724 bits (365), Expect = 0.0
Identities = 368/369 (99%)
Strand = Plus / Plus
Query: 1 atgttgtctttgcttcctttttgtagagcgcggtttgataggaactctgccgcagcttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atgttgtctttgcttcctttttgtagagcgcggtttgataggaactctgccgcagcttgt 98
Query: 61 gcagcgggatcaactccctctcccctttctgagcttagttcgaagccgtttttcttgtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 gcagcgggatcaactccctctcccctttctgagcttagttcgaagccgtttttcttgtac 158
Query: 121 catagaagtattcgcttccgagccaagtcgcacgcctcttcgtttgtcatgacatcccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 catagaagtattcgcttccgagccaagtcgcacgcctcttcgtttgtcatgacatcccac 218
Query: 181 agaccatcactggccagaatgagacactcgtcctcttttgcacgaggaagaaatctaact 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ggaccatcactggccagaatgagacactcgtcctcttttgcacgaggaagaaatctaact 278
Query: 241 tccggttccggaataatccacggcttcaaatatctatcacctggcagtcacagcaaagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tccggttccggaataatccacggcttcaaatatctatcacctggcagtcacagcaaagca 338
Query: 301 cagaacctcagctggataaactgcataattattaaaggactcccagttgcaaacaaaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cagaacctcagctggataaactgcataattattaaaggactcccagttgcaaacaaaagt 398
Query: 361 gatacttga 369
|||||||||
Sbjct: 399 gatacttga 407
>gnl|LJGI|CN825208 homologue to UniRef100_A4Q9A0 Cluster: Abscisic insensitive 1B;
n=1; Populus tremula|Rep: Abscisic insensitive 1B -
Populus tremula (European aspen), partial (33%)
Length = 589
Score = 557 bits (281), Expect = e-158
Identities = 281/281 (100%)
Strand = Plus / Minus
Query: 1 atgttgtctttgcttcctttttgtagagcgcggtttgataggaactctgccgcagcttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 atgttgtctttgcttcctttttgtagagcgcggtttgataggaactctgccgcagcttgt 427
Query: 61 gcagcgggatcaactccctctcccctttctgagcttagttcgaagccgtttttcttgtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gcagcgggatcaactccctctcccctttctgagcttagttcgaagccgtttttcttgtac 367
Query: 121 catagaagtattcgcttccgagccaagtcgcacgcctcttcgtttgtcatgacatcccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 catagaagtattcgcttccgagccaagtcgcacgcctcttcgtttgtcatgacatcccac 307
Query: 181 agaccatcactggccagaatgagacactcgtcctcttttgcacgaggaagaaatctaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agaccatcactggccagaatgagacactcgtcctcttttgcacgaggaagaaatctaact 247
Query: 241 tccggttccggaataatccacggcttcaaatatctatcacc 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tccggttccggaataatccacggcttcaaatatctatcacc 206
>gnl|LJGI|TC72759 similar to UniRef100_A4Q9A0 Cluster: Abscisic insensitive 1B; n=1;
Populus tremula|Rep: Abscisic insensitive 1B - Populus
tremula (European aspen), partial (33%)
Length = 968
Score = 541 bits (273), Expect = e-153
Identities = 279/281 (99%)
Strand = Plus / Minus
Query: 1 atgttgtctttgcttcctttttgtagagcgcggtttgataggaactctgccgcagcttgt 60
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 531 atgttgtctttgcttccttttggtagagcgcggttggataggaactctgccgcagcttgt 472
Query: 61 gcagcgggatcaactccctctcccctttctgagcttagttcgaagccgtttttcttgtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gcagcgggatcaactccctctcccctttctgagcttagttcgaagccgtttttcttgtac 412
Query: 121 catagaagtattcgcttccgagccaagtcgcacgcctcttcgtttgtcatgacatcccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 catagaagtattcgcttccgagccaagtcgcacgcctcttcgtttgtcatgacatcccac 352
Query: 181 agaccatcactggccagaatgagacactcgtcctcttttgcacgaggaagaaatctaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 agaccatcactggccagaatgagacactcgtcctcttttgcacgaggaagaaatctaact 292
Query: 241 tccggttccggaataatccacggcttcaaatatctatcacc 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tccggttccggaataatccacggcttcaaatatctatcacc 251
>gnl|LJGI|TC71104 similar to UniRef100_A4Q9A0 Cluster: Abscisic insensitive 1B; n=1;
Populus tremula|Rep: Abscisic insensitive 1B - Populus
tremula (European aspen), partial (14%)
Length = 574
Score = 123 bits (62), Expect = 8e-28
Identities = 152/182 (83%)
Strand = Plus / Minus
Query: 1 atgttgtctttgcttcctttttgtagagcgcggtttgataggaactctgccgcagcttgt 60
||||| |||||||||||||| | ||||| ||||||||||||||||| || || ||||||
Sbjct: 182 atgttatctttgcttcctttcagaagagcacggtttgataggaactccgcagctgcttgt 123
Query: 61 gcagcgggatcaactccctctcccctttctgagcttagttcgaagccgtttttcttgtac 120
||||||||||||| ||| ||||||||||||||| | ||||| |||||||||| |
Sbjct: 122 gcagcgggatcaattccttctcccctttctgaggacatggacaagccatttttcttgtgc 63
Query: 121 catagaagtattcgcttccgagccaagtcgcacgcctcttcgtttgtcatgacatcccac 180
|| | |||||| || ||||||| | ||| || |||||||| ||||||||||||||||||
Sbjct: 62 cagaaaagtatgcgtctccgagctaggtcacatgcctcttcatttgtcatgacatcccac 3
Query: 181 ag 182
||
Sbjct: 2 ag 1