Miyakogusa Predicted Gene

Lj0g3v0254459.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0254459.1 Non Chatacterized Hit- tr|I3T709|I3T709_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,71.21,2e-18,
,CUFF.16695.1
         (201 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63743 similar to UniRef100_A7R0J6 Cluster: Chromosome...   174   1e-43
gnl|LJGI|AV774311                                                      66   9e-11

>gnl|LJGI|TC63743 similar to UniRef100_A7R0J6 Cluster: Chromosome undetermined
           scaffold_310, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_310,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           complete
          Length = 1187

 Score =  174 bits (88), Expect = 1e-43
 Identities = 142/160 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgactgtatctgggttgagtggttgtctctcaagatgtctccatttaactactggttgc 60
           ||||||||||||||||||||||||||||| |||||||||| ||||||| || ||||||||
Sbjct: 169 atgactgtatctgggttgagtggttgtctttcaagatgtccccatttacctcctggttgc 228

                                                                       
Query: 61  ttggcatcaccccatgtccgggttttgttcaatcctgtgcctgggaaacataaacaaggg 120
           |||||||||||||||||||||||| ||  |    ||||| ||||||||| ||||||||||
Sbjct: 229 ttggcatcaccccatgtccgggttatggccttatctgtggctgggaaacgtaaacaaggg 288

                                                   
Query: 121 acagcgtgtctccaactggaaagaacaagtttttcgtctc 160
           |||  |||||||| | ||||||||||||||||||| ||||
Sbjct: 289 acaatgtgtctccgagtggaaagaacaagtttttcatctc 328


>gnl|LJGI|AV774311 
          Length = 431

 Score = 65.9 bits (33), Expect = 9e-11
 Identities = 46/49 (93%), Gaps = 1/49 (2%)
 Strand = Plus / Plus

                                                            
Query: 1   atgactgtatctgggttgagtggttgtctctcaagatgt-ctccattta 48
           |||||||||||||||||||||| |||||| ||||||||| |||||||||
Sbjct: 94  atgactgtatctgggttgagtgtttgtctatcaagatgtcctccattta 142