Miyakogusa Predicted Gene
- Lj0g3v0254329.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0254329.2 tr|G7KIF1|G7KIF1_MEDTR Resistance protein
OS=Medicago truncatula GN=MTR_6g072310 PE=4
SV=1,27.17,0.000000003,TIR,Toll/interleukin-1 receptor homology (TIR)
domain; Toll,Toll/interleukin-1 receptor homology (TI,CUFF.16724.2
(1611 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74331 weakly similar to UniRef100_A7PQ07 Cluster: Chr... 1132 0.0
gnl|LJGI|DC599828 weakly similar to UniRef100_A7PQ23 Cluster: Ch... 682 0.0
gnl|LJGI|TC78027 weakly similar to UniRef100_Q19PJ3 Cluster: TIR... 94 3e-18
gnl|LJGI|FS326348 weakly similar to UniRef100_A7QH65 Cluster: Ch... 72 1e-11
gnl|LJGI|TC78835 similar to UniRef100_A8VXI4 Cluster: Envelope g... 66 7e-10
gnl|LJGI|GO011648 weakly similar to UniRef100_A7PQ15 Cluster: Ch... 54 3e-06
gnl|LJGI|TC82575 weakly similar to UniRef100_Q8S4X3 Cluster: TIR... 54 3e-06
>gnl|LJGI|TC74331 weakly similar to UniRef100_A7PQ07 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 811
Score = 1132 bits (571), Expect = 0.0
Identities = 580/583 (99%)
Strand = Plus / Plus
Query: 1029 cattgaggagtggaaaaccttattatacagtttgagacattcggctcgttaccaaatctt 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cattgaggagtggaaaaccttattatacagtttgagacattcggctcgttaccaaatctt 61
Query: 1089 tatcagctttaggggaggtgatactcgccactcttttacaggtttcctctatgatgcttt 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tatcagctttaggggaggtgatactcgccactcttttacaggtttcctctatgatgcttt 121
Query: 1149 gtgccgagagggattcaagaccttcatggatgatggggaattggagtgcggcgaccagat 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtgccgagagggattcaagaccttcatggatgatggggaattggagtgcggcgaccagat 181
Query: 1209 ttcacaaactcttattaacgcaattgaagcatcaagactttccattattgttctatctga 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttcacaaactcttattaacgcaattgaagcatcaagactttccattattgttctatctga 241
Query: 1269 aaattatgcgaaatctgcatggtgtcttgatgaacttgataagatcctggagtgtatgac 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaattatgcgaaatctgcatggtgtcttgatgaacttgataagatcctggagtgtatgac 301
Query: 1329 gacgaagaatcaattagtttggccaatcttttataaagtggaaccatcagatgtaagatt 1388
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gacgaagaatcaattagtttggccaatcttttataaagtggaaccatcagatgtaagata 361
Query: 1389 tcagaaaaatcgttatggagaagccatggttgcacatgaaaatagatttgtgtatgattc 1448
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 362 tcagaaaaatagttatggagaagccatggatgcacatgaaaatagatttgtgtatgattc 421
Query: 1449 tgagatgattcaaaactggaggtcagctttgtttaaagttgctggcttgtctggaatgac 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgagatgattcaaaactggaggtcagctttgtttaaagttgctggcttgtctggaatgac 481
Query: 1509 ttatagtactgggtatgaatataagtttattcaaacaattgtggaaagggccaagaataa 1568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttatagtactgggtatgaatataagtttattcaaacaattgtggaaagggccaagaataa 541
Query: 1569 taagaatcgcttgtttatacaaagcacagatatggagtagaag 1611
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 taagaatcgcttgtttatacaaagcacagatatggagtagaag 584
>gnl|LJGI|DC599828 weakly similar to UniRef100_A7PQ23 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 539
Score = 682 bits (344), Expect = 0.0
Identities = 490/539 (90%)
Strand = Plus / Plus
Query: 974 gtcaagggttacctcgtacaattaaagaagtgggatcttccttaaaaagtcaacccattg 1033
|||||||||||| | ||||||||||||| ||||||||||||||| || ||||||||||||
Sbjct: 1 gtcaagggttacttggtacaattaaagatgtgggatcttccttacaatgtcaacccattg 60
Query: 1034 aggagtggaaaaccttattatacagtttgagacattcggctcgttaccaaatctttatca 1093
||||||||||| | ||| || | || ||||||||||||||||| |||||||||||| |||
Sbjct: 61 aggagtggaaagcattaatagatagcttgagacattcggctcgctaccaaatctttctca 120
Query: 1094 gctttaggggaggtgatactcgccactcttttacaggtttcctctatgatgctttgtgcc 1153
|||||||||||| |||||||||| |||||||||| |||| |||||||||||| ||||||
Sbjct: 121 gctttaggggagatgatactcgctactcttttactggttctctctatgatgctctgtgcc 180
Query: 1154 gagagggattcaagaccttcatggatgatggggaattggagtgcggcgaccagatttcac 1213
||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||
Sbjct: 181 gagagggattcaagaccttcatggatgatgggggattggagggtggcgaccagatttcac 240
Query: 1214 aaactcttattaacgcaattgaagcatcaagactttccattattgttctatctgaaaatt 1273
|||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 241 aaactcttatcactgcaattgaagcatcaaggctttctattattgttctatctgaaaatt 300
Query: 1274 atgcgaaatctgcatggtgtcttgatgaacttgataagatcctggagtgtatgacgacga 1333
|||| ||||| |||||||||||||||||||||| |||||| |||||||||||| ||| |
Sbjct: 301 atgcaaaatccgcatggtgtcttgatgaacttgtcaagatcgtggagtgtatgaagacaa 360
Query: 1334 agaatcaattagtttggccaatcttttataaagtggaaccatcagatgtaagatttcaga 1393
|||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||
Sbjct: 361 agaatcaattagtttggccaatcttttacaaggtggaaccatcagatgtaagatatcaga 420
Query: 1394 aaaatcgttatggagaagccatggttgcacatgaaaatagatttgtgtatgattctgaga 1453
||||| |||| ||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 421 aaaatagttacggagaagccatggttgcacataaaaatagatttgtgaatgattctgaga 480
Query: 1454 tgattcaaaactggaggtcagctttgtttaaagttgctggcttgtctggaatgacttat 1512
||||| || ||||||| |||||||||| ||||||||||||| ||||||||| |||||
Sbjct: 481 agattcnaagatggaggttagctttgtttgaagttgctggcttatctggaatggcttat 539
>gnl|LJGI|TC78027 weakly similar to UniRef100_Q19PJ3 Cluster: TIR-NBS-LRR type disease
resistance protein; n=1; Populus trichocarpa|Rep:
TIR-NBS-LRR type disease resistance protein - Populus
trichocarpa (Western balsam poplar) (Populus
balsamiferasubsp. trichocarpa), partial (8%)
Length = 1162
Score = 93.7 bits (47), Expect = 3e-18
Identities = 260/331 (78%)
Strand = Plus / Plus
Query: 1108 gatactcgccactcttttacaggtttcctctatgatgctttgtgccgagagggattcaag 1167
||||| || |||||||||||||| | || ||| |||||||| |||||||||||| ||
Sbjct: 584 gatacccgtcactcttttacaggagttctttatcatgctttgcaccgagagggatttaaa 643
Query: 1168 accttcatggatgatggggaattggagtgcggcgaccagatttcacaaactcttattaac 1227
| ||||||||||||| |||||||||| | || | || |||||| |||||||| | |
Sbjct: 644 atattcatggatgatgaggaattggagggtgggaatcaaatttcaaaaactcttctcgag 703
Query: 1228 gcaattgaagcatcaagactttccattattgttctatctgaaaattatgcgaaatctgca 1287
|||||||| |||||| ||||| ||| ||||| | |||||||| ||||| | ||| ||
Sbjct: 704 tcaattgaaaaatcaaggctttcgattgttgttttctctgaaaactatgcatattcttca 763
Query: 1288 tggtgtcttgatgaacttgataagatcctggagtgtatgacgacgaagaatcaattagtt 1347
|||||||| ||||||||||| || ||| | || || |||| || || ||||||||||||
Sbjct: 764 tggtgtctcgatgaacttgacaaaatcattgaatgcatgaaaactaacaatcaattagtt 823
Query: 1348 tggccaatcttttataaagtggaaccatcagatgtaagatttcagaaaaatcgttatgga 1407
||| || ||||| ||||| || || | ||||||||| ||| | |||| | |||||
Sbjct: 824 ctgccgatattttacaaagtagagccgttagatgtaagcaatcaaacaaatagctatggg 883
Query: 1408 gaagccatggttgcacatgaaaatagatttg 1438
| |||||| |||| ||||||||||| ||||
Sbjct: 884 catgccatgattgcgcatgaaaataggtttg 914
>gnl|LJGI|FS326348 weakly similar to UniRef100_A7QH65 Cluster: Chromosome chr18
scaffold_96, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_96, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 817
Score = 71.9 bits (36), Expect = 1e-11
Identities = 120/148 (81%)
Strand = Plus / Plus
Query: 1155 agagggattcaagaccttcatggatgatggggaattggagtgcggcgaccagatttcaca 1214
|||||||||||| ||||| |||||||||| |||||||||| |||| ||||||||||| |
Sbjct: 665 agagggattcaaaacctttatggatgatgaggaattggagggcgggaaccagatttcaaa 724
Query: 1215 aactcttattaacgcaattgaagcatcaagactttccattattgttctatctgaaaatta 1274
||||| | | ||||||||| ||| || ||||| ||| ||||| | |||||||| ||
Sbjct: 725 tactctcctggaggcaattgaaaaatcgaggctttcaattgttgttttctctgaaaacta 784
Query: 1275 tgcgaaatctgcatggtgtcttgatgaa 1302
|| | || |||||||||||||||||
Sbjct: 785 tggatactccacatggtgtcttgatgaa 812
>gnl|LJGI|TC78835 similar to UniRef100_A8VXI4 Cluster: Envelope glycoprotein; n=1;
Human immunodeficiency virus 1|Rep: Envelope
glycoprotein - Human immunodeficiency virus 1, partial
(7%)
Length = 663
Score = 65.9 bits (33), Expect = 7e-10
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 114 tgtgctggaaaaggttgaagctatgaagaaaacagaaaaagtcaatgatgttgttctgaa 173
||||||| ||| |||||||| || || | |||||||||||||||||||| |||| || |
Sbjct: 183 tgtgctgaaaatggttgaagatacaaacagaacagaaaaagtcaatgatgctgttatgga 242
Query: 174 gtggctaaaagaagcagagaagctcatagaagaggag 210
|||| |||| || || || || |||||||||||||||
Sbjct: 243 gtggttaaatgatgccgaaaaactcatagaagaggag 279
>gnl|LJGI|GO011648 weakly similar to UniRef100_A7PQ15 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 722
Score = 54.0 bits (27), Expect = 3e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1333 aagaatcaattagtttggccaatcttttataaagt 1367
|||||||||||| |||||||||| |||||||||||
Sbjct: 506 aagaatcaattaatttggccaattttttataaagt 540
>gnl|LJGI|TC82575 weakly similar to UniRef100_Q8S4X3 Cluster:
TIR-similar-domain-containing protein TSDC; n=1; Pisum
sativum|Rep: TIR-similar-domain-containing protein TSDC -
Pisum sativum (Garden pea), partial (15%)
Length = 886
Score = 54.0 bits (27), Expect = 3e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1337 atcaattagtttggccaatcttttataaagt 1367
||||| |||||||||||||||||||||||||
Sbjct: 51 atcaactagtttggccaatcttttataaagt 81