Miyakogusa Predicted Gene

Lj0g3v0254159.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0254159.1 Non Chatacterized Hit- tr|I3SXJ5|I3SXJ5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,76.24,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; Mitochondrial termination
factor repeats,Mitochodri,CUFF.16675.1
         (1165 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chr...  1039   0.0  
gnl|LJGI|GO024260 weakly similar to UniRef100_A7NW61 Cluster: Ch...   664   0.0  
gnl|LJGI|BW631473 weakly similar to UniRef100_A7NW61 Cluster: Ch...   456   e-127
gnl|LJGI|TC80892 weakly similar to UniRef100_A7NW61 Cluster: Chr...   180   1e-44
gnl|LJGI|AV765169 weakly similar to UniRef100_A7NW61 Cluster: Ch...   159   5e-38
gnl|LJGI|TC77615 weakly similar to UniRef100_A7NW61 Cluster: Chr...   109   4e-23
gnl|LJGI|TC72488                                                       76   5e-13
gnl|LJGI|TC82521 similar to UniRef100_Q6V4T2 Cluster: TnpA C-ter...    68   1e-10

>gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chromosome chr7
            scaffold_31, whole genome shotgun sequence; n=2; Vitis
            vinifera|Rep: Chromosome chr7 scaffold_31, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (10%)
          Length = 1406

 Score = 1039 bits (524), Expect = 0.0
 Identities = 998/1157 (86%), Gaps = 18/1157 (1%)
 Strand = Plus / Plus

                                                                        
Query: 9    tcacggtcaccgtctcagagcttttctccgccgcagcactttctcccaaccaccaccacc 68
            ||||||||| ||||||||||||||  ||||| ||||||||||||||||| ||||||||  
Sbjct: 59   tcacggtcatcgtctcagagctttcttccgctgcagcactttctcccaaacaccacca-- 116

                                                                        
Query: 69   aacctccgaatgttaccttcttcttcctcatcagaaacccttcttcccctgcccattatc 128
             ||||   ||||| ||||||||||||  || | |||||||      | |  |||||||||
Sbjct: 117  -accttaaaatgtcaccttcttcttctgcaactgaaaccc------caccacccattatc 169

                                                                        
Query: 129  aatagtatctcataacttgttctcaaccacttctgattcttctgataaacaatccttcac 188
            |||||||||||| ||||||||||||||||||||||||         ||||||||||||||
Sbjct: 170  aatagtatctcacaacttgttctcaaccacttctgat---------aaacaatccttcac 220

                                                                        
Query: 189  cgtttcatacttcactaacacttgtggcttctcaccacaagctgctctcaaagcagccaa 248
             ||||| |||||||||||||  ||||| |||||||  |||||||||||||||||| ||||
Sbjct: 221  tgtttcctacttcactaacaactgtggattctcacaccaagctgctctcaaagcatccaa 280

                                                                        
Query: 249  gcgagttcgtttcgacaccgcagagaagcccgactcggtcatcgccttcttcacaaacca 308
             ||||||| ||||||   |||| | |||||||||||||| ||||||||||||||||||||
Sbjct: 281  ccgagttcttttcgatgacgcaaacaagcccgactcggttatcgccttcttcacaaacca 340

                                                                        
Query: 309  cggtttctccatctcccagacacacaacatcattcgcagggtaccagagctgcttttact 368
            |||||||||||||||||||||||| ||||||||  ||| |||||||||||| |||  |  
Sbjct: 341  cggtttctccatctcccagacacagaacatcatcggcaaggtaccagagcttcttacatg 400

                                                                        
Query: 369  cgattccaccaaaagggttttgcccaagtttcaatttatagcctccaaaggttttgacat 428
            | |  ||||||||||||||||||| |||||||||||  ||||||||||||||| |||| |
Sbjct: 401  caaccccaccaaaagggttttgcctaagtttcaattcttagcctccaaaggttctgacgt 460

                                                                        
Query: 429  agttaccactgtgactaggtacccgtatttcctgcttaaaagccttgagaatcacattat 488
            ||| |||||||||||||||  |||||||||||||   ||||| |||||||||||||||||
Sbjct: 461  agtcaccactgtgactaggagcccgtatttcctgtgcaaaagtcttgagaatcacattat 520

                                                                        
Query: 489  acctgcatttgaatttgtcaggagattctctccatctgatgaaaaagcattagcttgtgc 548
            ||||| |||||||||||| ||||  ||||  | ||||||||||| |||| | ||||||| 
Sbjct: 521  acctgtatttgaatttgtaaggacgttctgccaatctgatgaaagagcaatcgcttgtgt 580

                                                                        
Query: 549  actttttggttccacttcctatactattgctctcatgaaatcaaaagtacaattgttgct 608
            ||| |||||||||| | ||  |  ||||| || |||||||||||||||| ||||||||||
Sbjct: 581  actatttggttccaataccattgttattgatcgcatgaaatcaaaagtaaaattgttgct 640

                                                                        
Query: 609  tgatatgggagtgccaccctcaaacatatacattttgcttagaactaggccctctatgct 668
            | ||||||||||| | |||||||||||  ||   |||||||  ||| |||||||| ||||
Sbjct: 641  taatatgggagtgactccctcaaacatccaccagttgcttactacttggccctctgtgct 700

                                                                        
Query: 669  cggatgtgctaacatgaaggaggccgtggaggaagtcaagggattgggatttcatccctc 728
            |  ||||||| || ||| |||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 701  caaatgtgctgacttgacggaggctgtggtggaagtcaagggattgggatttcatccctc 760

                                                                        
Query: 729  caaaacgcattttgttgcagcattacaggccaaaagttctatacccaaatcactttggga 788
            |||| ||||||||||| ||||||||| || ||||||   |||| ||||||| | ||||||
Sbjct: 761  caaatcgcattttgtttcagcattacgggtcaaaaggggtatatccaaatcgccttggga 820

                                                                        
Query: 789  tgccaaactcgatgcctttaagacatggggctggtctgaagatgttgttctggatgcatt 848
            |||||||||||||||||||||||||||||||||  ||||||||| | |||||||||||||
Sbjct: 821  tgccaaactcgatgcctttaagacatggggctgccctgaagatgctattctggatgcatt 880

                                                                        
Query: 849  taggagggatccccacattatgctaaactcaatcaaaaaagttaatgcagtgatgaattt 908
            ||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |||
Sbjct: 881  taggaggtatccccacatgatgctatactcaatcaaaaaagttaatgcagtgatgagttt 940

                                                                        
Query: 909  ttgggtcggccatcttggttgggacccttcagtgcttctagcagcgccatgcctttttgg 968
            |||||||| ||||||||||||||||||||||||||||||||| | ||||   ||||||  
Sbjct: 941  ttgggtcgtccatcttggttgggacccttcagtgcttctagccgtgccaacacttttttc 1000

                                                                        
Query: 969  atatagtttggagaaaaggcttatgccaagggctttagttgtccagtatcttctctccag 1028
            ||  |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 1001 attaagtttggagaaaaggcttatcccaagggcttcagttgtccagtatcttctctccag 1060

                                                                        
Query: 1029 aggtttgatgaagaagaatgctagcttaagttcaccatttatgtatacagataagttgtt 1088
            ||| |||||||||||| |||||||||||||| |||||||||| | ||| || ||| ||||
Sbjct: 1061 aggattgatgaagaaggatgctagcttaagtacaccatttatatgtactgacaagctgtt 1120

                                                                        
Query: 1089 cctgcaaaaatttgtggaatgttttgaggaggaggaaacatctaagctactaagtctata 1148
            || ||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1121 ccagcaaaaatttgtgaattgttttgaggaggaggaagcatctaagctactaagtctata 1180

                             
Query: 1149 tcgtggaggatgctagc 1165
            ||| |||||| ||||||
Sbjct: 1181 tcggggaggaagctagc 1197


>gnl|LJGI|GO024260 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
            scaffold_2, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (4%)
          Length = 544

 Score =  664 bits (335), Expect = 0.0
 Identities = 485/535 (90%)
 Strand = Plus / Plus

                                                                        
Query: 570  tactattgctctcatgaaatcaaaagtacaattgttgcttgatatgggagtgccaccctc 629
            |||||||| || |||||||||||||||| ||||||||||| ||||||||||||| |||||
Sbjct: 3    tactattgatcacatgaaatcaaaagtaaaattgttgcttcatatgggagtgcctccctc 62

                                                                        
Query: 630  aaacatatacattttgcttagaactaggccctctatgctcggatgtgctaacatgaagga 689
            |||||||||| |||||||||||||||||||| |||| ||| |||||||| || |||| ||
Sbjct: 63   aaacatataccttttgcttagaactaggcccactatactcagatgtgctgacttgaacga 122

                                                                        
Query: 690  ggccgtggaggaagtcaagggattgggatttcatccctccaaaacgcattttgttgcagc 749
            ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 123  ggctgtggaggaagtcaagggattgggatttcatccctccaaatcgcattttgttgtagc 182

                                                                        
Query: 750  attacaggccaaaagttctatacccaaatcactttgggatgccaaactcgatgcctttaa 809
             ||||||||||||||   |||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 183  gttacaggccaaaaggggtatatccaaatcactttgggatgccaaagtcgatgcctttaa 242

                                                                        
Query: 810  gacatggggctggtctgaagatgttgttctggatgcatttaggagggatccccacattat 869
            |||||| |||||||||||||||| | || ||||||||||||||||| |||||||||||||
Sbjct: 243  gacatgtggctggtctgaagatgctattttggatgcatttaggaggaatccccacattat 302

                                                                        
Query: 870  gctaaactcaatcaaaaaagttaatgcagtgatgaatttttgggtcggccatcttggttg 929
            ||||  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 303  gctatgctcaatcaaaaaagttaatgcagtgatgagtttttgggtcggccgtcttggttg 362

                                                                        
Query: 930  ggacccttcagtgcttctagcagcgccatgcctttttggatatagtttggagaaaaggct 989
            ||||||||||||||||||||| | |||||  ||||||  ||  |||||||||||||||||
Sbjct: 363  ggacccttcagtgcttctagccgtgccatcacttttttcattaagtttggagaaaaggct 422

                                                                        
Query: 990  tatgccaagggctttagttgtccagtatcttctctccagaggtttgatgaagaagaatgc 1049
            ||| |||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 423  tatcccaagggcttcagttgtccagtatcttctctccagaggattgatgaagaaggatgc 482

                                                                   
Query: 1050 tagcttaagttcaccatttatgtatacagataagttgttcctgcaaaaatttgtg 1104
            |||||||||| |||||||||| | ||| || ||||  ||||||||||| ||||||
Sbjct: 483  tagcttaagtacaccatttatatgtactgagaagtatttcctgcaaaagtttgtg 537


>gnl|LJGI|BW631473 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
           scaffold_2, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (5%)
          Length = 475

 Score =  456 bits (230), Expect = e-127
 Identities = 314/342 (91%)
 Strand = Plus / Plus

                                                                       
Query: 148 ttctcaaccacttctgattcttctgataaacaatccttcaccgtttcatacttcactaac 207
           ||||| ||||||||| ||||||||||||||||||| |||||| |||| |||||||| |||
Sbjct: 134 ttctctaccacttctcattcttctgataaacaatcattcaccctttcctacttcacaaac 193

                                                                       
Query: 208 acttgtggcttctcaccacaagctgctctcaaagcagccaagcgagttcgtttcgacacc 267
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 acttgtggcttctcatcccaagctgctctcaaagcagccaagcgagttcgtttcgacacc 253

                                                                       
Query: 268 gcagagaagcccgactcggtcatcgccttcttcacaaaccacggtttctccatctcccag 327
           ||||||||||| || || || || ||||||||||||||||| |||||||||||||| |||
Sbjct: 254 gcagagaagcctgattcagttattgccttcttcacaaaccagggtttctccatctctcag 313

                                                                       
Query: 328 acacacaacatcattcgcagggtaccagagctgcttttactcgattccaccaaaagggtt 387
           ||||||| |||||||||||||||||||||| | |||||| ||||  |||||| |||||||
Sbjct: 314 acacacagcatcattcgcagggtaccagaggtacttttattcgaccccaccataagggtt 373

                                                                       
Query: 388 ttgcccaagtttcaatttatagcctccaaaggttttgacatagttaccactgtgactagg 447
           |||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||||
Sbjct: 374 ttgcccaagtttcaatttctagcctccaagggttttgacatagtgaccactgtgtctagg 433

                                                     
Query: 448 tacccgtatttcctgcttaaaagccttgagaatcacattata 489
             ||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 accccgtatttcctgcttaaaagccttgagaatcacattata 475



 Score = 93.7 bits (47), Expect = 2e-18
 Identities = 53/55 (96%)
 Strand = Plus / Plus

                                                                 
Query: 12 cggtcaccgtctcagagcttttctccgccgcagcactttctcccaaccaccacca 66
          ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 22 cggtcactgtctcagagcttttctccgccgcagcattttctcccaaccaccacca 76


>gnl|LJGI|TC80892 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
           scaffold_2, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (5%)
          Length = 488

 Score =  180 bits (91), Expect = 1e-44
 Identities = 246/299 (82%), Gaps = 9/299 (3%)
 Strand = Plus / Plus

                                                                       
Query: 122 cattatcaatagtatctcataacttgttctcaaccacttctgattcttctgataaacaat 181
           ||||||||||||||||||| ||||||||||||||||||| ||||         |||||||
Sbjct: 85  cattatcaatagtatctcacaacttgttctcaaccacttgtgat---------aaacaat 135

                                                                       
Query: 182 ccttcaccgtttcatacttcactaacacttgtggcttctcaccacaagctgctctcaaag 241
           ||||||| ||||| |||||||  | ||  ||||| |||||||  ||||| ||||||||||
Sbjct: 136 ccttcactgtttcctacttcaaaaccaactgtggattctcacaccaagcagctctcaaag 195

                                                                       
Query: 242 cagccaagcgagttcgtttcgacaccgcagagaagcccgactcggtcatcgccttcttca 301
           || ||||||||||||  ||| ||  |||| | || ||||| || |||||| |||||||||
Sbjct: 196 catccaagcgagttctcttcaacgacgcaaacaaacccgattcagtcatcaccttcttca 255

                                                                       
Query: 302 caaaccacggtttctccatctcccagacacacaacatcattcgcagggtaccagagctgc 361
           |||||||||||||| || ||||||| ||||||||| ||||| ||||   ||||||||| |
Sbjct: 256 caaaccacggtttcaccctctcccaaacacacaacgtcattggcagaacaccagagcttc 315

                                                                      
Query: 362 ttttactcgattccaccaaaagggttttgcccaagtttcaatttatagcctccaaaggt 420
           || |  ||||  |||||| || | || ||||||||||||||||| ||||||||||||||
Sbjct: 316 ttctcttcgaccccaccacaaagcttctgcccaagtttcaatttctagcctccaaaggt 374


>gnl|LJGI|AV765169 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
            scaffold_2, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (4%)
          Length = 573

 Score =  159 bits (80), Expect = 5e-38
 Identities = 278/344 (80%)
 Strand = Plus / Minus

                                                                        
Query: 799  gatgcctttaagacatggggctggtctgaagatgttgttctggatgcatttaggagggat 858
            ||||| || |||| |||||| ||||||||||||  |||| | ||||||||||||||| | 
Sbjct: 563  gatgctttgaagaaatggggttggtctgaagatactgttgttgatgcatttaggaggcaa 504

                                                                        
Query: 859  ccccacattatgctaaactcaatcaaaaaagttaatgcagtgatgaatttttgggtcggc 918
            |||  ||||||| |||  || |   | ||| | ||||||||||||||||| ||||| |  
Sbjct: 503  cccagcattatgttaaggtctactgagaaactcaatgcagtgatgaatttgtgggttgat 444

                                                                        
Query: 919  catcttggttgggacccttcagtgcttctagcagcgccatgcctttttggatatagtttg 978
            || |||||||||||  |||| | ||||||||| || ||     | ||||||||||| |||
Sbjct: 443  cagcttggttgggatacttcggcgcttctagctgcaccgataatatttggatatagcttg 384

                                                                        
Query: 979  gagaaaaggcttatgccaagggctttagttgtccagtatcttctctccagaggtttgatg 1038
            ||||| ||| |||| |||||||||| ||||||| ||||||||||||| | ||||||||||
Sbjct: 383  gagaagaggattattccaagggcttcagttgtcaagtatcttctctctaaaggtttgatg 324

                                                                        
Query: 1039 aagaagaatgctagcttaagttcaccatttatgtatacagataagttgttcctgcaaaaa 1098
            |||||| | |||||||||| | ||||||||   |  || ||| || ||||||||||||| 
Sbjct: 323  aagaaggaagctagcttaactacaccatttggtttgactgatgagctgttcctgcaaaag 264

                                                        
Query: 1099 tttgtggaatgttttgaggaggaggaaacatctaagctactaag 1142
            || ||| | ||||||||| ||||||||||||||| ||| |||||
Sbjct: 263  ttcgtgaactgttttgagaaggaggaaacatctaggctgctaag 220


>gnl|LJGI|TC77615 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
            scaffold_2, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (4%)
          Length = 482

 Score =  109 bits (55), Expect = 4e-23
 Identities = 192/235 (81%), Gaps = 2/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 896  cagtgatgaatttttgggtcggccatcttggttgggacccttcagtgcttctagcagcgc 955
            ||||||||| |||||||||| |||| ||||| |||||  |||||   ||||||||| | |
Sbjct: 28   cagtgatgagtttttgggtcagccagcttgggtgggattcttcaacacttctagcatcac 87

                                                                        
Query: 956  catgcctttttggatatagtttggagaaaaggcttatgccaagggctttagttgtccagt 1015
            |   | ||||||||| ||||||||||| |||| || | |||||||||| |||||| ||||
Sbjct: 88   ccatcatttttggatttagtttggagacaaggattgttccaagggcttcagttgttcagt 147

                                                                        
Query: 1016 atcttctctccagaggtttgatgaagaagaatgctagcttaagttcaccatttatgtat- 1074
            |||||||||| | |||||||||||||||   |||||| |||  | |||| ||| ||| | 
Sbjct: 148  atcttctctctaaaggtttgatgaagaaaggtgctagtttagttacacc-tttttgtttg 206

                                                                   
Query: 1075 acagataagttgttcctgcaaaaatttgtggaatgttttgaggaggaggaaacat 1129
            || ||||||||||||||||| || |||||   |||||||||| ||| ||||||||
Sbjct: 207  actgataagttgttcctgcagaagtttgttacatgttttgagaagggggaaacat 261


>gnl|LJGI|TC72488 
          Length = 631

 Score = 75.8 bits (38), Expect = 5e-13
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                       
Query: 211 tgtggcttctcaccacaagctgctctcaaagcagccaagcgagttcgtttcgacaccgca 270
           ||||| ||| |||||||| | ||||| |||||  | ||||| ||||||||||||||||| 
Sbjct: 215 tgtggtttcacaccacaatcagctctaaaagcttctaagcgcgttcgtttcgacaccgcg 274

                                         
Query: 271 gagaagcccgactcggtcatcgccttcttc 300
            |||||||||| || |||||||||||||||
Sbjct: 275 aagaagcccgaatcagtcatcgccttcttc 304



 Score = 52.0 bits (26), Expect = 8e-06
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 468 aagccttgagaatcacattatacctgcatttgaatttgtcaggagattctctccatctga 527
           |||||||||||| ||||| || ||||| | |||||| || |||||||||| ||| |||||
Sbjct: 481 aagccttgagaagcacataatccctgcttatgaattggtaaggagattctgtccttctga 540

             
Query: 528 tg 529
           ||
Sbjct: 541 tg 542


>gnl|LJGI|TC82521 similar to UniRef100_Q6V4T2 Cluster: TnpA C-terminal; n=1;
           Enterococcus faecium|Rep: TnpA C-terminal - Enterococcus
           faecium (Streptococcus faecium), partial (18%)
          Length = 484

 Score = 67.9 bits (34), Expect = 1e-10
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                       
Query: 211 tgtggcttctcaccacaagctgctctcaaagcagccaagcgagttcgtttcgacaccgca 270
           ||||| ||| |||||||| | ||||| |||||  | ||||| ||||||||||||||||| 
Sbjct: 238 tgtggtttcacaccacaatcagctctaaaagcttctaagcgcgttcgtttcgacaccgcg 297

                                         
Query: 271 gagaagcccgactcggtcatcgccttcttc 300
            |||||||||| ||  ||||||||||||||
Sbjct: 298 aagaagcccgaatcaatcatcgccttcttc 327



 Score = 61.9 bits (31), Expect = 8e-09
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 378 caaaagggttttgcccaagtttcaatttatagcctccaaaggt 420
           ||||||||| ||||| |||||||||||| ||||||||||||||
Sbjct: 405 caaaagggtattgccaaagtttcaatttctagcctccaaaggt 447