Miyakogusa Predicted Gene
- Lj0g3v0254159.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0254159.1 Non Chatacterized Hit- tr|I3SXJ5|I3SXJ5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,76.24,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; Mitochondrial termination
factor repeats,Mitochodri,CUFF.16675.1
(1165 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chr... 1039 0.0
gnl|LJGI|GO024260 weakly similar to UniRef100_A7NW61 Cluster: Ch... 664 0.0
gnl|LJGI|BW631473 weakly similar to UniRef100_A7NW61 Cluster: Ch... 456 e-127
gnl|LJGI|TC80892 weakly similar to UniRef100_A7NW61 Cluster: Chr... 180 1e-44
gnl|LJGI|AV765169 weakly similar to UniRef100_A7NW61 Cluster: Ch... 159 5e-38
gnl|LJGI|TC77615 weakly similar to UniRef100_A7NW61 Cluster: Chr... 109 4e-23
gnl|LJGI|TC72488 76 5e-13
gnl|LJGI|TC82521 similar to UniRef100_Q6V4T2 Cluster: TnpA C-ter... 68 1e-10
>gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chromosome chr7
scaffold_31, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr7 scaffold_31, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 1406
Score = 1039 bits (524), Expect = 0.0
Identities = 998/1157 (86%), Gaps = 18/1157 (1%)
Strand = Plus / Plus
Query: 9 tcacggtcaccgtctcagagcttttctccgccgcagcactttctcccaaccaccaccacc 68
||||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 59 tcacggtcatcgtctcagagctttcttccgctgcagcactttctcccaaacaccacca-- 116
Query: 69 aacctccgaatgttaccttcttcttcctcatcagaaacccttcttcccctgcccattatc 128
|||| ||||| |||||||||||| || | ||||||| | | |||||||||
Sbjct: 117 -accttaaaatgtcaccttcttcttctgcaactgaaaccc------caccacccattatc 169
Query: 129 aatagtatctcataacttgttctcaaccacttctgattcttctgataaacaatccttcac 188
|||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 170 aatagtatctcacaacttgttctcaaccacttctgat---------aaacaatccttcac 220
Query: 189 cgtttcatacttcactaacacttgtggcttctcaccacaagctgctctcaaagcagccaa 248
||||| ||||||||||||| ||||| ||||||| |||||||||||||||||| ||||
Sbjct: 221 tgtttcctacttcactaacaactgtggattctcacaccaagctgctctcaaagcatccaa 280
Query: 249 gcgagttcgtttcgacaccgcagagaagcccgactcggtcatcgccttcttcacaaacca 308
||||||| |||||| |||| | |||||||||||||| ||||||||||||||||||||
Sbjct: 281 ccgagttcttttcgatgacgcaaacaagcccgactcggttatcgccttcttcacaaacca 340
Query: 309 cggtttctccatctcccagacacacaacatcattcgcagggtaccagagctgcttttact 368
|||||||||||||||||||||||| |||||||| ||| |||||||||||| ||| |
Sbjct: 341 cggtttctccatctcccagacacagaacatcatcggcaaggtaccagagcttcttacatg 400
Query: 369 cgattccaccaaaagggttttgcccaagtttcaatttatagcctccaaaggttttgacat 428
| | ||||||||||||||||||| ||||||||||| ||||||||||||||| |||| |
Sbjct: 401 caaccccaccaaaagggttttgcctaagtttcaattcttagcctccaaaggttctgacgt 460
Query: 429 agttaccactgtgactaggtacccgtatttcctgcttaaaagccttgagaatcacattat 488
||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||
Sbjct: 461 agtcaccactgtgactaggagcccgtatttcctgtgcaaaagtcttgagaatcacattat 520
Query: 489 acctgcatttgaatttgtcaggagattctctccatctgatgaaaaagcattagcttgtgc 548
||||| |||||||||||| |||| |||| | ||||||||||| |||| | |||||||
Sbjct: 521 acctgtatttgaatttgtaaggacgttctgccaatctgatgaaagagcaatcgcttgtgt 580
Query: 549 actttttggttccacttcctatactattgctctcatgaaatcaaaagtacaattgttgct 608
||| |||||||||| | || | ||||| || |||||||||||||||| ||||||||||
Sbjct: 581 actatttggttccaataccattgttattgatcgcatgaaatcaaaagtaaaattgttgct 640
Query: 609 tgatatgggagtgccaccctcaaacatatacattttgcttagaactaggccctctatgct 668
| ||||||||||| | ||||||||||| || ||||||| ||| |||||||| ||||
Sbjct: 641 taatatgggagtgactccctcaaacatccaccagttgcttactacttggccctctgtgct 700
Query: 669 cggatgtgctaacatgaaggaggccgtggaggaagtcaagggattgggatttcatccctc 728
| ||||||| || ||| |||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 701 caaatgtgctgacttgacggaggctgtggtggaagtcaagggattgggatttcatccctc 760
Query: 729 caaaacgcattttgttgcagcattacaggccaaaagttctatacccaaatcactttggga 788
|||| ||||||||||| ||||||||| || |||||| |||| ||||||| | ||||||
Sbjct: 761 caaatcgcattttgtttcagcattacgggtcaaaaggggtatatccaaatcgccttggga 820
Query: 789 tgccaaactcgatgcctttaagacatggggctggtctgaagatgttgttctggatgcatt 848
||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||
Sbjct: 821 tgccaaactcgatgcctttaagacatggggctgccctgaagatgctattctggatgcatt 880
Query: 849 taggagggatccccacattatgctaaactcaatcaaaaaagttaatgcagtgatgaattt 908
||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |||
Sbjct: 881 taggaggtatccccacatgatgctatactcaatcaaaaaagttaatgcagtgatgagttt 940
Query: 909 ttgggtcggccatcttggttgggacccttcagtgcttctagcagcgccatgcctttttgg 968
|||||||| ||||||||||||||||||||||||||||||||| | |||| ||||||
Sbjct: 941 ttgggtcgtccatcttggttgggacccttcagtgcttctagccgtgccaacacttttttc 1000
Query: 969 atatagtttggagaaaaggcttatgccaagggctttagttgtccagtatcttctctccag 1028
|| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 1001 attaagtttggagaaaaggcttatcccaagggcttcagttgtccagtatcttctctccag 1060
Query: 1029 aggtttgatgaagaagaatgctagcttaagttcaccatttatgtatacagataagttgtt 1088
||| |||||||||||| |||||||||||||| |||||||||| | ||| || ||| ||||
Sbjct: 1061 aggattgatgaagaaggatgctagcttaagtacaccatttatatgtactgacaagctgtt 1120
Query: 1089 cctgcaaaaatttgtggaatgttttgaggaggaggaaacatctaagctactaagtctata 1148
|| ||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1121 ccagcaaaaatttgtgaattgttttgaggaggaggaagcatctaagctactaagtctata 1180
Query: 1149 tcgtggaggatgctagc 1165
||| |||||| ||||||
Sbjct: 1181 tcggggaggaagctagc 1197
>gnl|LJGI|GO024260 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 544
Score = 664 bits (335), Expect = 0.0
Identities = 485/535 (90%)
Strand = Plus / Plus
Query: 570 tactattgctctcatgaaatcaaaagtacaattgttgcttgatatgggagtgccaccctc 629
|||||||| || |||||||||||||||| ||||||||||| ||||||||||||| |||||
Sbjct: 3 tactattgatcacatgaaatcaaaagtaaaattgttgcttcatatgggagtgcctccctc 62
Query: 630 aaacatatacattttgcttagaactaggccctctatgctcggatgtgctaacatgaagga 689
|||||||||| |||||||||||||||||||| |||| ||| |||||||| || |||| ||
Sbjct: 63 aaacatataccttttgcttagaactaggcccactatactcagatgtgctgacttgaacga 122
Query: 690 ggccgtggaggaagtcaagggattgggatttcatccctccaaaacgcattttgttgcagc 749
||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 123 ggctgtggaggaagtcaagggattgggatttcatccctccaaatcgcattttgttgtagc 182
Query: 750 attacaggccaaaagttctatacccaaatcactttgggatgccaaactcgatgcctttaa 809
|||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 183 gttacaggccaaaaggggtatatccaaatcactttgggatgccaaagtcgatgcctttaa 242
Query: 810 gacatggggctggtctgaagatgttgttctggatgcatttaggagggatccccacattat 869
|||||| |||||||||||||||| | || ||||||||||||||||| |||||||||||||
Sbjct: 243 gacatgtggctggtctgaagatgctattttggatgcatttaggaggaatccccacattat 302
Query: 870 gctaaactcaatcaaaaaagttaatgcagtgatgaatttttgggtcggccatcttggttg 929
|||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 303 gctatgctcaatcaaaaaagttaatgcagtgatgagtttttgggtcggccgtcttggttg 362
Query: 930 ggacccttcagtgcttctagcagcgccatgcctttttggatatagtttggagaaaaggct 989
||||||||||||||||||||| | ||||| |||||| || |||||||||||||||||
Sbjct: 363 ggacccttcagtgcttctagccgtgccatcacttttttcattaagtttggagaaaaggct 422
Query: 990 tatgccaagggctttagttgtccagtatcttctctccagaggtttgatgaagaagaatgc 1049
||| |||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 423 tatcccaagggcttcagttgtccagtatcttctctccagaggattgatgaagaaggatgc 482
Query: 1050 tagcttaagttcaccatttatgtatacagataagttgttcctgcaaaaatttgtg 1104
|||||||||| |||||||||| | ||| || |||| ||||||||||| ||||||
Sbjct: 483 tagcttaagtacaccatttatatgtactgagaagtatttcctgcaaaagtttgtg 537
>gnl|LJGI|BW631473 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 475
Score = 456 bits (230), Expect = e-127
Identities = 314/342 (91%)
Strand = Plus / Plus
Query: 148 ttctcaaccacttctgattcttctgataaacaatccttcaccgtttcatacttcactaac 207
||||| ||||||||| ||||||||||||||||||| |||||| |||| |||||||| |||
Sbjct: 134 ttctctaccacttctcattcttctgataaacaatcattcaccctttcctacttcacaaac 193
Query: 208 acttgtggcttctcaccacaagctgctctcaaagcagccaagcgagttcgtttcgacacc 267
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 acttgtggcttctcatcccaagctgctctcaaagcagccaagcgagttcgtttcgacacc 253
Query: 268 gcagagaagcccgactcggtcatcgccttcttcacaaaccacggtttctccatctcccag 327
||||||||||| || || || || ||||||||||||||||| |||||||||||||| |||
Sbjct: 254 gcagagaagcctgattcagttattgccttcttcacaaaccagggtttctccatctctcag 313
Query: 328 acacacaacatcattcgcagggtaccagagctgcttttactcgattccaccaaaagggtt 387
||||||| |||||||||||||||||||||| | |||||| |||| |||||| |||||||
Sbjct: 314 acacacagcatcattcgcagggtaccagaggtacttttattcgaccccaccataagggtt 373
Query: 388 ttgcccaagtttcaatttatagcctccaaaggttttgacatagttaccactgtgactagg 447
|||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||||
Sbjct: 374 ttgcccaagtttcaatttctagcctccaagggttttgacatagtgaccactgtgtctagg 433
Query: 448 tacccgtatttcctgcttaaaagccttgagaatcacattata 489
||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 accccgtatttcctgcttaaaagccttgagaatcacattata 475
Score = 93.7 bits (47), Expect = 2e-18
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 12 cggtcaccgtctcagagcttttctccgccgcagcactttctcccaaccaccacca 66
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 22 cggtcactgtctcagagcttttctccgccgcagcattttctcccaaccaccacca 76
>gnl|LJGI|TC80892 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 488
Score = 180 bits (91), Expect = 1e-44
Identities = 246/299 (82%), Gaps = 9/299 (3%)
Strand = Plus / Plus
Query: 122 cattatcaatagtatctcataacttgttctcaaccacttctgattcttctgataaacaat 181
||||||||||||||||||| ||||||||||||||||||| |||| |||||||
Sbjct: 85 cattatcaatagtatctcacaacttgttctcaaccacttgtgat---------aaacaat 135
Query: 182 ccttcaccgtttcatacttcactaacacttgtggcttctcaccacaagctgctctcaaag 241
||||||| ||||| ||||||| | || ||||| ||||||| ||||| ||||||||||
Sbjct: 136 ccttcactgtttcctacttcaaaaccaactgtggattctcacaccaagcagctctcaaag 195
Query: 242 cagccaagcgagttcgtttcgacaccgcagagaagcccgactcggtcatcgccttcttca 301
|| |||||||||||| ||| || |||| | || ||||| || |||||| |||||||||
Sbjct: 196 catccaagcgagttctcttcaacgacgcaaacaaacccgattcagtcatcaccttcttca 255
Query: 302 caaaccacggtttctccatctcccagacacacaacatcattcgcagggtaccagagctgc 361
|||||||||||||| || ||||||| ||||||||| ||||| |||| ||||||||| |
Sbjct: 256 caaaccacggtttcaccctctcccaaacacacaacgtcattggcagaacaccagagcttc 315
Query: 362 ttttactcgattccaccaaaagggttttgcccaagtttcaatttatagcctccaaaggt 420
|| | |||| |||||| || | || ||||||||||||||||| ||||||||||||||
Sbjct: 316 ttctcttcgaccccaccacaaagcttctgcccaagtttcaatttctagcctccaaaggt 374
>gnl|LJGI|AV765169 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 573
Score = 159 bits (80), Expect = 5e-38
Identities = 278/344 (80%)
Strand = Plus / Minus
Query: 799 gatgcctttaagacatggggctggtctgaagatgttgttctggatgcatttaggagggat 858
||||| || |||| |||||| |||||||||||| |||| | ||||||||||||||| |
Sbjct: 563 gatgctttgaagaaatggggttggtctgaagatactgttgttgatgcatttaggaggcaa 504
Query: 859 ccccacattatgctaaactcaatcaaaaaagttaatgcagtgatgaatttttgggtcggc 918
||| ||||||| ||| || | | ||| | ||||||||||||||||| ||||| |
Sbjct: 503 cccagcattatgttaaggtctactgagaaactcaatgcagtgatgaatttgtgggttgat 444
Query: 919 catcttggttgggacccttcagtgcttctagcagcgccatgcctttttggatatagtttg 978
|| ||||||||||| |||| | ||||||||| || || | ||||||||||| |||
Sbjct: 443 cagcttggttgggatacttcggcgcttctagctgcaccgataatatttggatatagcttg 384
Query: 979 gagaaaaggcttatgccaagggctttagttgtccagtatcttctctccagaggtttgatg 1038
||||| ||| |||| |||||||||| ||||||| ||||||||||||| | ||||||||||
Sbjct: 383 gagaagaggattattccaagggcttcagttgtcaagtatcttctctctaaaggtttgatg 324
Query: 1039 aagaagaatgctagcttaagttcaccatttatgtatacagataagttgttcctgcaaaaa 1098
|||||| | |||||||||| | |||||||| | || ||| || |||||||||||||
Sbjct: 323 aagaaggaagctagcttaactacaccatttggtttgactgatgagctgttcctgcaaaag 264
Query: 1099 tttgtggaatgttttgaggaggaggaaacatctaagctactaag 1142
|| ||| | ||||||||| ||||||||||||||| ||| |||||
Sbjct: 263 ttcgtgaactgttttgagaaggaggaaacatctaggctgctaag 220
>gnl|LJGI|TC77615 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 482
Score = 109 bits (55), Expect = 4e-23
Identities = 192/235 (81%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 896 cagtgatgaatttttgggtcggccatcttggttgggacccttcagtgcttctagcagcgc 955
||||||||| |||||||||| |||| ||||| ||||| ||||| ||||||||| | |
Sbjct: 28 cagtgatgagtttttgggtcagccagcttgggtgggattcttcaacacttctagcatcac 87
Query: 956 catgcctttttggatatagtttggagaaaaggcttatgccaagggctttagttgtccagt 1015
| | ||||||||| ||||||||||| |||| || | |||||||||| |||||| ||||
Sbjct: 88 ccatcatttttggatttagtttggagacaaggattgttccaagggcttcagttgttcagt 147
Query: 1016 atcttctctccagaggtttgatgaagaagaatgctagcttaagttcaccatttatgtat- 1074
|||||||||| | ||||||||||||||| |||||| ||| | |||| ||| ||| |
Sbjct: 148 atcttctctctaaaggtttgatgaagaaaggtgctagtttagttacacc-tttttgtttg 206
Query: 1075 acagataagttgttcctgcaaaaatttgtggaatgttttgaggaggaggaaacat 1129
|| ||||||||||||||||| || ||||| |||||||||| ||| ||||||||
Sbjct: 207 actgataagttgttcctgcagaagtttgttacatgttttgagaagggggaaacat 261
>gnl|LJGI|TC72488
Length = 631
Score = 75.8 bits (38), Expect = 5e-13
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 211 tgtggcttctcaccacaagctgctctcaaagcagccaagcgagttcgtttcgacaccgca 270
||||| ||| |||||||| | ||||| ||||| | ||||| |||||||||||||||||
Sbjct: 215 tgtggtttcacaccacaatcagctctaaaagcttctaagcgcgttcgtttcgacaccgcg 274
Query: 271 gagaagcccgactcggtcatcgccttcttc 300
|||||||||| || |||||||||||||||
Sbjct: 275 aagaagcccgaatcagtcatcgccttcttc 304
Score = 52.0 bits (26), Expect = 8e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 468 aagccttgagaatcacattatacctgcatttgaatttgtcaggagattctctccatctga 527
|||||||||||| ||||| || ||||| | |||||| || |||||||||| ||| |||||
Sbjct: 481 aagccttgagaagcacataatccctgcttatgaattggtaaggagattctgtccttctga 540
Query: 528 tg 529
||
Sbjct: 541 tg 542
>gnl|LJGI|TC82521 similar to UniRef100_Q6V4T2 Cluster: TnpA C-terminal; n=1;
Enterococcus faecium|Rep: TnpA C-terminal - Enterococcus
faecium (Streptococcus faecium), partial (18%)
Length = 484
Score = 67.9 bits (34), Expect = 1e-10
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 211 tgtggcttctcaccacaagctgctctcaaagcagccaagcgagttcgtttcgacaccgca 270
||||| ||| |||||||| | ||||| ||||| | ||||| |||||||||||||||||
Sbjct: 238 tgtggtttcacaccacaatcagctctaaaagcttctaagcgcgttcgtttcgacaccgcg 297
Query: 271 gagaagcccgactcggtcatcgccttcttc 300
|||||||||| || ||||||||||||||
Sbjct: 298 aagaagcccgaatcaatcatcgccttcttc 327
Score = 61.9 bits (31), Expect = 8e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 378 caaaagggttttgcccaagtttcaatttatagcctccaaaggt 420
||||||||| ||||| |||||||||||| ||||||||||||||
Sbjct: 405 caaaagggtattgccaaagtttcaatttctagcctccaaaggt 447