Miyakogusa Predicted Gene
- Lj0g3v0254089.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0254089.1 Non Chatacterized Hit- tr|D7TGI1|D7TGI1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.43,3e-16,UNCHARACTERIZED,NULL; seg,NULL; SNARE_assoc,SNARE
associated Golgi protein,CUFF.16670.1
(858 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60812 similar to UniRef100_A7QK93 Cluster: Chromosome... 662 0.0
gnl|LJGI|TC70454 similar to UniRef100_O49666 Cluster: Predicted ... 563 e-160
gnl|LJGI|TC71837 weakly similar to UniRef100_Q9LNA0 Cluster: F5O... 192 2e-48
gnl|LJGI|TC70878 similar to UniRef100_O49666 Cluster: Predicted ... 74 2e-12
>gnl|LJGI|TC60812 similar to UniRef100_A7QK93 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 795
Score = 662 bits (334), Expect = 0.0
Identities = 340/342 (99%)
Strand = Plus / Plus
Query: 150 gattttgttcgtgggttcgttggctgttgttgtgatcaagtgggttggaccctatttcat 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gattttgttcgtgggttcgttggctgttgttgtgatcaagtgggttggaccctatttcat 513
Query: 210 tgacaaggaggttattccaataataaattgggaaactgagactttcagtaccccagtgct 269
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 514 tgacaaggaggttattccaataataaattgggaaactgagactttcattaccccagtgct 573
Query: 270 tatccttttggtatttgtttcggtagcgctgttcccgaccttacttttgccatctacacc 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tatccttttggtatttgtttcggtagcgctgttcccgaccttacttttgccatctacacc 633
Query: 330 ctctatgtgggtggctggaatgacatttggttatggctttgggttcttgctgataattac 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ctctatgtgggtggctggaatgacatttggttatggctttgggttcttgctgataattac 693
Query: 390 tgcagcagctattggtgtgtcactcccttttttcattggctcaaccttccatcataaaat 449
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tgcagcagctattgttgtgtcactcccttttttcattggctcaaccttccatcataaaat 753
Query: 450 tgaaggatggttagagaagtatccaaagagagcttctgttat 491
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tgaaggatggttagagaagtatccaaagagagcttctgttat 795
Score = 297 bits (150), Expect = 6e-80
Identities = 150/150 (100%)
Strand = Plus / Plus
Query: 1 atgacgtattatgaggatgaaggcggtggtcggagagtggaggtggtgtgtcaaattgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atgacgtattatgaggatgaaggcggtggtcggagagtggaggtggtgtgtcaaattgag 331
Query: 61 gataataatattaatggggactatgtcaaattggggcccggtgctgtagacgattctccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gataataatattaatggggactatgtcaaattggggcccggtgctgtagacgattctccg 391
Query: 121 ccagctcctcctgcgccggggagaagatcg 150
||||||||||||||||||||||||||||||
Sbjct: 392 ccagctcctcctgcgccggggagaagatcg 421
>gnl|LJGI|TC70454 similar to UniRef100_O49666 Cluster: Predicted protein; n=1;
Arabidopsis thaliana|Rep: Predicted protein -
Arabidopsis thaliana (Mouse-ear cress), partial (20%)
Length = 752
Score = 563 bits (284), Expect = e-160
Identities = 284/284 (100%)
Strand = Plus / Plus
Query: 575 acaactattgtgctgtggcaacaaatgttaagtatgggccttacattattggatccttgg 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaactattgtgctgtggcaacaaatgttaagtatgggccttacattattggatccttgg 60
Query: 635 ttggaatggtgccggaaatatttgttgcaatctataccggaatattgattcggactttgg 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttggaatggtgccggaaatatttgttgcaatctataccggaatattgattcggactttgg 120
Query: 695 ctgatgcttcacatgaaaagcgatctctgtctgcgccgcaaatcattctcaatgttctag 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgatgcttcacatgaaaagcgatctctgtctgcgccgcaaatcattctcaatgttctag 180
Query: 755 gattctgtgtaactgtggccacgaccattgttgtcacagtgtatgctaagagacggctca 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gattctgtgtaactgtggccacgaccattgttgtcacagtgtatgctaagagacggctca 240
Query: 815 aggagttacagagtgaggatgacgagtcgttgttgagatagtcc 858
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggagttacagagtgaggatgacgagtcgttgttgagatagtcc 284
>gnl|LJGI|TC71837 weakly similar to UniRef100_Q9LNA0 Cluster: F5O11.19; n=1;
Arabidopsis thaliana|Rep: F5O11.19 - Arabidopsis
thaliana (Mouse-ear cress), partial (40%)
Length = 748
Score = 192 bits (97), Expect = 2e-48
Identities = 235/281 (83%)
Strand = Plus / Plus
Query: 307 accttacttttgccatctacaccctctatgtgggtggctggaatgacatttggttatggc 366
||||| |||||||| ||| |||| || |||||| ||||||||||| |||||||||||
Sbjct: 460 accttgcttttgccctcttcaccttccatgtggatggctggaatgctatttggttatgtt 519
Query: 367 tttgggttcttgctgataattactgcagcagctattggtgtgtcactcccttttttcatt 426
|| || ||| |||| |||||| ||||||| ||| | || || || ||||| |||||||||
Sbjct: 520 ttaggattcatgctaataatttctgcagctgctgtgggagtatccctcccctttttcatt 579
Query: 427 ggctcaaccttccatcataaaattgaaggatggttagagaagtatccaaagagagcttct 486
|| |||| |||||||| ||||| ||||| |||||||| ||||||||||||| |||||||
Sbjct: 580 ggttcaatcttccatcgcaaaatcgaagggtggttagaaaagtatccaaagaaagcttct 639
Query: 487 gttataagatctgctggtggaggaaactgggttcatcagtttcgagcagttaccttgatt 546
||| |||||| ||| |||| |||||| ||| |||||||||||| |||| |||| || ||
Sbjct: 640 gttttaagatttgccggtgaaggaaattggtttcatcagtttcaagcaattactttaata 699
Query: 547 aggatttctccattcccttacataatctacaactattgtgc 587
||||||||||||||||| || || ||| ||||||||||||
Sbjct: 700 aggatttctccattcccgtatattctcttcaactattgtgc 740
>gnl|LJGI|TC70878 similar to UniRef100_O49666 Cluster: Predicted protein; n=1;
Arabidopsis thaliana|Rep: Predicted protein -
Arabidopsis thaliana (Mouse-ear cress), partial (18%)
Length = 569
Score = 73.8 bits (37), Expect = 2e-12
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 592 gcaacaaatgttaagtatgggccttacattattggatccttggttggaatggtgccggaa 651
||||||| |||||||||||| |||||| | ||||||||||| ||||||||||| |||
Sbjct: 7 gcaacaactgttaagtatggcccttacttgtgcggatccttggtaggaatggtgccagaa 66
Query: 652 atatttgttgcaatctataccggaatattgattcggactttggctgatgcttcacat 708
|| ||||| || ||||||| ||||| ||||| || || ||||| |||||||||||
Sbjct: 67 gtacttgtttcactctatacgggaattttgatccgaacgttggcccatgcttcacat 123
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 788 tcacagtgtatgctaagagacggctcaaggagttacaga 826
||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 203 tcacagtctatgctaagaggcggctcaaagagttacaga 241