Miyakogusa Predicted Gene
- Lj0g3v0253949.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0253949.1 Non Chatacterized Hit- tr|I1JEL5|I1JEL5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8679 PE=,89.15,0,WD40
repeat-like,WD40-repeat-containing domain; WD40,WD40 repeat; WD40
repeats,WD40 repeat; no descr,CUFF.16661.1
(384 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61577 similar to UniRef100_A7Q6X6 Cluster: Chromosome... 761 0.0
gnl|LJGI|TC59341 similar to UniRef100_A7Q6X6 Cluster: Chromosome... 464 e-130
gnl|LJGI|BW632626 similar to UniRef100_A7Q6X6 Cluster: Chromosom... 454 e-127
gnl|LJGI|TC71932 similar to UniRef100_A7Q6X6 Cluster: Chromosome... 111 3e-24
>gnl|LJGI|TC61577 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 827
Score = 761 bits (384), Expect = 0.0
Identities = 384/384 (100%)
Strand = Plus / Plus
Query: 1 atgtccactttcggtgccgcaaacacaaatccaaacaaatcgcacgaggtagcacaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atgtccactttcggtgccgcaaacacaaatccaaacaaatcgcacgaggtagcacaacca 188
Query: 61 ccttccgattctgtttcaagtctttgtttcagtcccaaagccaatttcctcgtcgctact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ccttccgattctgtttcaagtctttgtttcagtcccaaagccaatttcctcgtcgctact 248
Query: 121 tcatgggacaaccaggttaggtgttgggagatttcaaagaatggaaatgttgtcaacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tcatgggacaaccaggttaggtgttgggagatttcaaagaatggaaatgttgtcaacact 308
Query: 181 acgcccaaggcttcaatttctcatgaccaaccagttttgtgctctgcttggaaggatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 acgcccaaggcttcaatttctcatgaccaaccagttttgtgctctgcttggaaggatgat 368
Query: 241 ggaacaacagttttctctggaggctgtgacaagcaggtcaagatgtggccgcttttgtcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ggaacaacagttttctctggaggctgtgacaagcaggtcaagatgtggccgcttttgtcg 428
Query: 301 ggtggacaaccagtgactgttgccatgcatgatgctcctattaaagatcttgcgtggata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggtggacaaccagtgactgttgccatgcatgatgctcctattaaagatcttgcgtggata 488
Query: 361 ccggaaattagccttttagccacc 384
||||||||||||||||||||||||
Sbjct: 489 ccggaaattagccttttagccacc 512
>gnl|LJGI|TC59341 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 1439
Score = 464 bits (234), Expect = e-130
Identities = 321/350 (91%)
Strand = Plus / Plus
Query: 34 aacaaatcgcacgaggtagcacaaccaccttccgattctgtttcaagtctttgtttcagt 93
|||||||||||||||||| | ||||||||| |||||| |||| ||||| |||||||||
Sbjct: 118 aacaaatcgcacgaggtatctcaaccacctggtgattctatttcgagtctctgtttcagt 177
Query: 94 cccaaagccaatttcctcgtcgctacttcatgggacaaccaggttaggtgttgggagatt 153
|||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||
Sbjct: 178 cccaaagccaatttcctcgtcgctacttcatgggacaatcaggttcggtgctgggagatt 237
Query: 154 tcaaagaatggaaatgttgtcaacactacgcccaaggcttcaatttctcatgaccaacca 213
|||| |||||| |||||| |||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 238 tcaaggaatgggaatgttatcaatactactcccaaggcttcaatttctcatgaacaacca 297
Query: 214 gttttgtgctctgcttggaaggatgatggaacaacagttttctctggaggctgtgacaag 273
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 298 gttttgtgctctgcttggaaggatgatggaacaacagttttttctggaggctgtgacaag 357
Query: 274 caggtcaagatgtggccgcttttgtcgggtggacaaccagtgactgttgccatgcatgat 333
|||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||
Sbjct: 358 caggtcaagatgtggccgcttttgtccggtggacaaccgatgactgttgctatgcatgat 417
Query: 334 gctcctattaaagatcttgcgtggataccggaaattagccttttagccac 383
||||| ||||| ||||| |||||||||||||| | | ||||||||||||
Sbjct: 418 gctcccattaaggatctcgcgtggataccggagttgaaccttttagccac 467
>gnl|LJGI|BW632626 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 476
Score = 454 bits (229), Expect = e-127
Identities = 304/329 (92%)
Strand = Plus / Plus
Query: 34 aacaaatcgcacgaggtagcacaaccaccttccgattctgtttcaagtctttgtttcagt 93
|||||||||||||||||| | ||||||||| |||||| |||| ||||| |||||||||
Sbjct: 148 aacaaatcgcacgaggtatctcaaccacctggtgattctatttcgagtctctgtttcagt 207
Query: 94 cccaaagccaatttcctcgtcgctacttcatgggacaaccaggttaggtgttgggagatt 153
|||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||
Sbjct: 208 cccaaagccaatttcctcgtcgctacttcatgggacaatcaggttcggtgctgggagatt 267
Query: 154 tcaaagaatggaaatgttgtcaacactacgcccaaggcttcaatttctcatgaccaacca 213
|||| |||||| |||||| |||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 268 tcaaggaatgggaatgttatcaatactactcccaaggcttcaatttctcatgaacaacca 327
Query: 214 gttttgtgctctgcttggaaggatgatggaacaacagttttctctggaggctgtgacaag 273
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 328 gttttgtgctctgcttggaaggatgatggaacaacagttttttctggaggctgtgacaag 387
Query: 274 caggtcaagatgtggccgcttttgtcgggtggacaaccagtgactgttgccatgcatgat 333
|||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||
Sbjct: 388 caggtcaagatgtggccgcttttgtccggtggacaaccgatgactgttgctatgcatgat 447
Query: 334 gctcctattaaagatcttgcgtggatacc 362
||||| ||||| ||||| |||||||||||
Sbjct: 448 gctcccattaaggatctcgcgtggatacc 476
>gnl|LJGI|TC71932 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 755
Score = 111 bits (56), Expect = 3e-24
Identities = 161/196 (82%)
Strand = Plus / Plus
Query: 184 cccaaggcttcaatttctcatgaccaaccagttttgtgctctgcttggaaggatgatgga 243
||||| ||||| || |||||||| ||||| ||| |||| |||||||||||||| || ||
Sbjct: 298 cccaaagcttccatctctcatgatcaaccggttctgtgttctgcttggaaggacgacggc 357
Query: 244 acaacagttttctctggaggctgtgacaagcaggtcaagatgtggccgcttttgtcgggt 303
|| || || ||||| || || ||||||||||| |||||||||||||| || ||||| ||
Sbjct: 358 accactgtcttctccggtggatgtgacaagcaagtcaagatgtggcctctcttgtctgga 417
Query: 304 ggacaaccagtgactgttgccatgcatgatgctcctattaaagatcttgcgtggataccg 363
|||||||| ||||||| |||||||| ||||| || ||||||| |||| ||||| ||
Sbjct: 418 ggacaaccgatgactgtcgccatgcacgatgcacccgttaaagacattgcttggattcct 477
Query: 364 gaaattagccttttag 379
|| || ||||||||||
Sbjct: 478 gagatgagccttttag 493