Miyakogusa Predicted Gene

Lj0g3v0253939.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0253939.1 Non Chatacterized Hit- tr|I1JEL5|I1JEL5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8679 PE=,93.96,0,WD40
repeats,WD40 repeat; WD40,WD40 repeat; no description,WD40/YVTN
repeat-like-containing domain; ,CUFF.16660.1
         (549 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59341 similar to UniRef100_A7Q6X6 Cluster: Chromosome...   777   0.0  
gnl|LJGI|TC61577 similar to UniRef100_A7Q6X6 Cluster: Chromosome...   410   e-114
gnl|LJGI|TC62048 similar to UniRef100_Q38942 Cluster: Rae1-like ...   353   7e-97

>gnl|LJGI|TC59341 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_57, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (96%)
          Length = 1439

 Score =  777 bits (392), Expect = 0.0
 Identities = 508/549 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggttgtggggactgctgatagaaatcttgttgtcttcaacttgcagaatcctcagact 60
            ||||||||||  ||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 577  atggttgtggcaactgccgatagaaatcttattgtcttcaacttgcagaatcctcagact 636

                                                                        
Query: 61   gagtacaaaagaattgtatctcccctgaagtatcagacaagatgtgttgctgcttttcca 120
            |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 637  gagtacaaaagaatcgcatctcccctgaagtatcagacaagatgtgttgctgcctttcaa 696

                                                                        
Query: 121  gatcagcaaggttttctggttggttcaatagaaggaagggttggagtacatcacctggat 180
            || |||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 697  gaccagcaaggatttttggttggctcaatagaaggaagggttggagtacatcacctggat 756

                                                                        
Query: 181  gatgcacaacaaagcaagaattttacttttaaatgccatagagaaaataatgagatatat 240
            |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 757  gatggacaacaaaacaagaattttacttttaaatgccatagagaaaataatgacatatac 816

                                                                        
Query: 241  tcagtgaattccttaaatttccatccggtacatcacacttttgcaactgcaggatctgat 300
            || ||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 817  tctgtgaactccttaaatttccatccggtatatcacacttttgcaactgctggatctgat 876

                                                                        
Query: 301  ggtgcttttaacttttgggataaggacagtaaacagagactcaaggctatgtcaaggtgt 360
            ||||||| ||| || |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 877  ggtgcttataatttctgggataaggacagtaaacagagactcaaggctatggcaaggtgt 936

                                                                        
Query: 361  agtcagcccataccttgcagtgcattcaataatgatggttccatatatgcttatgcggtt 420
            | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 937  aatcagcccataccttgcagtgcattcaatagtgatggttccatatatgcttatgcggtt 996

                                                                        
Query: 421  tgttatgattggagcaaaggagcagaaaatcacaatccagctacagcaaagaccaacann 480
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||  
Sbjct: 997  tgttatgattggagcaaaggagcagaaaatcacaatccaactacagcaaagagcaacatt 1056

                                                                        
Query: 481  nnnnngcacttacctcaggaatctgaggttaaaggtaagccacgaaccggagcaacgggt 540
                 |||||||||||||||| ||||||||||||||||||||  | | |||||||| |||
Sbjct: 1057 tttttgcacttacctcaggaaactgaggttaaaggtaagccaaaagctggagcaacaggt 1116

                     
Query: 541  agaaagtga 549
            |||||||||
Sbjct: 1117 agaaagtga 1125


>gnl|LJGI|TC61577 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_57, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (65%)
          Length = 827

 Score =  410 bits (207), Expect = e-114
 Identities = 207/207 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggttgtggggactgctgatagaaatcttgttgtcttcaacttgcagaatcctcagact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atggttgtggggactgctgatagaaatcttgttgtcttcaacttgcagaatcctcagact 680

                                                                       
Query: 61  gagtacaaaagaattgtatctcccctgaagtatcagacaagatgtgttgctgcttttcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagtacaaaagaattgtatctcccctgaagtatcagacaagatgtgttgctgcttttcca 740

                                                                       
Query: 121 gatcagcaaggttttctggttggttcaatagaaggaagggttggagtacatcacctggat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gatcagcaaggttttctggttggttcaatagaaggaagggttggagtacatcacctggat 800

                                      
Query: 181 gatgcacaacaaagcaagaattttact 207
           |||||||||||||||||||||||||||
Sbjct: 801 gatgcacaacaaagcaagaattttact 827


>gnl|LJGI|TC62048 similar to UniRef100_Q38942 Cluster: Rae1-like protein At1g80670;
           n=2; Arabidopsis thaliana|Rep: Rae1-like protein
           At1g80670 - Arabidopsis thaliana (Mouse-ear cress),
           partial (19%)
          Length = 745

 Score =  353 bits (178), Expect = 7e-97
 Identities = 192/199 (96%)
 Strand = Plus / Plus

                                                                       
Query: 351 gtcaaggtgtagtcagcccataccttgcagtgcattcaataatgatggttccatatatgc 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtcaaggtgtagtcagcccataccttgcagtgcattcaataatgatggttccatatatgc 60

                                                                       
Query: 411 ttatgcggtttgttatgattggagcaaaggagcagaaaatcacaatccagctacagcaaa 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttatgcggtttgttatgattggagcaaaggagcagaaaatcacaatccagctacagcaaa 120

                                                                       
Query: 471 gaccaacannnnnnngcacttacctcaggaatctgaggttaaaggtaagccacgaaccgg 530
           ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaccaacatttttttgcacttacctcaggaatctgaggttaaaggtaagccacgaaccgg 180

                              
Query: 531 agcaacgggtagaaagtga 549
           |||||||||||||||||||
Sbjct: 181 agcaacgggtagaaagtga 199