Miyakogusa Predicted Gene
- Lj0g3v0253939.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0253939.1 Non Chatacterized Hit- tr|I1JEL5|I1JEL5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8679 PE=,93.96,0,WD40
repeats,WD40 repeat; WD40,WD40 repeat; no description,WD40/YVTN
repeat-like-containing domain; ,CUFF.16660.1
(549 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59341 similar to UniRef100_A7Q6X6 Cluster: Chromosome... 777 0.0
gnl|LJGI|TC61577 similar to UniRef100_A7Q6X6 Cluster: Chromosome... 410 e-114
gnl|LJGI|TC62048 similar to UniRef100_Q38942 Cluster: Rae1-like ... 353 7e-97
>gnl|LJGI|TC59341 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 1439
Score = 777 bits (392), Expect = 0.0
Identities = 508/549 (92%)
Strand = Plus / Plus
Query: 1 atggttgtggggactgctgatagaaatcttgttgtcttcaacttgcagaatcctcagact 60
|||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 577 atggttgtggcaactgccgatagaaatcttattgtcttcaacttgcagaatcctcagact 636
Query: 61 gagtacaaaagaattgtatctcccctgaagtatcagacaagatgtgttgctgcttttcca 120
|||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 637 gagtacaaaagaatcgcatctcccctgaagtatcagacaagatgtgttgctgcctttcaa 696
Query: 121 gatcagcaaggttttctggttggttcaatagaaggaagggttggagtacatcacctggat 180
|| |||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 697 gaccagcaaggatttttggttggctcaatagaaggaagggttggagtacatcacctggat 756
Query: 181 gatgcacaacaaagcaagaattttacttttaaatgccatagagaaaataatgagatatat 240
|||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 757 gatggacaacaaaacaagaattttacttttaaatgccatagagaaaataatgacatatac 816
Query: 241 tcagtgaattccttaaatttccatccggtacatcacacttttgcaactgcaggatctgat 300
|| ||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 817 tctgtgaactccttaaatttccatccggtatatcacacttttgcaactgctggatctgat 876
Query: 301 ggtgcttttaacttttgggataaggacagtaaacagagactcaaggctatgtcaaggtgt 360
||||||| ||| || |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 877 ggtgcttataatttctgggataaggacagtaaacagagactcaaggctatggcaaggtgt 936
Query: 361 agtcagcccataccttgcagtgcattcaataatgatggttccatatatgcttatgcggtt 420
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 937 aatcagcccataccttgcagtgcattcaatagtgatggttccatatatgcttatgcggtt 996
Query: 421 tgttatgattggagcaaaggagcagaaaatcacaatccagctacagcaaagaccaacann 480
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 997 tgttatgattggagcaaaggagcagaaaatcacaatccaactacagcaaagagcaacatt 1056
Query: 481 nnnnngcacttacctcaggaatctgaggttaaaggtaagccacgaaccggagcaacgggt 540
|||||||||||||||| |||||||||||||||||||| | | |||||||| |||
Sbjct: 1057 tttttgcacttacctcaggaaactgaggttaaaggtaagccaaaagctggagcaacaggt 1116
Query: 541 agaaagtga 549
|||||||||
Sbjct: 1117 agaaagtga 1125
>gnl|LJGI|TC61577 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 827
Score = 410 bits (207), Expect = e-114
Identities = 207/207 (100%)
Strand = Plus / Plus
Query: 1 atggttgtggggactgctgatagaaatcttgttgtcttcaacttgcagaatcctcagact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atggttgtggggactgctgatagaaatcttgttgtcttcaacttgcagaatcctcagact 680
Query: 61 gagtacaaaagaattgtatctcccctgaagtatcagacaagatgtgttgctgcttttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagtacaaaagaattgtatctcccctgaagtatcagacaagatgtgttgctgcttttcca 740
Query: 121 gatcagcaaggttttctggttggttcaatagaaggaagggttggagtacatcacctggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gatcagcaaggttttctggttggttcaatagaaggaagggttggagtacatcacctggat 800
Query: 181 gatgcacaacaaagcaagaattttact 207
|||||||||||||||||||||||||||
Sbjct: 801 gatgcacaacaaagcaagaattttact 827
>gnl|LJGI|TC62048 similar to UniRef100_Q38942 Cluster: Rae1-like protein At1g80670;
n=2; Arabidopsis thaliana|Rep: Rae1-like protein
At1g80670 - Arabidopsis thaliana (Mouse-ear cress),
partial (19%)
Length = 745
Score = 353 bits (178), Expect = 7e-97
Identities = 192/199 (96%)
Strand = Plus / Plus
Query: 351 gtcaaggtgtagtcagcccataccttgcagtgcattcaataatgatggttccatatatgc 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcaaggtgtagtcagcccataccttgcagtgcattcaataatgatggttccatatatgc 60
Query: 411 ttatgcggtttgttatgattggagcaaaggagcagaaaatcacaatccagctacagcaaa 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttatgcggtttgttatgattggagcaaaggagcagaaaatcacaatccagctacagcaaa 120
Query: 471 gaccaacannnnnnngcacttacctcaggaatctgaggttaaaggtaagccacgaaccgg 530
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaccaacatttttttgcacttacctcaggaatctgaggttaaaggtaagccacgaaccgg 180
Query: 531 agcaacgggtagaaagtga 549
|||||||||||||||||||
Sbjct: 181 agcaacgggtagaaagtga 199