Miyakogusa Predicted Gene

Lj0g3v0253719.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0253719.1 Non Chatacterized Hit- tr|I6M4F5|I6M4F5_COFCA
Uncharacterized protein OS=Coffea canephora PE=4
SV=1,100,0.0000000002,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.16647.1
         (558 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69097 similar to UniRef100_A7PUX9 Cluster: Chromosome...   747   0.0  

>gnl|LJGI|TC69097 similar to UniRef100_A7PUX9 Cluster: Chromosome chr4 scaffold_32,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_32, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (82%)
          Length = 1630

 Score =  747 bits (377), Expect = 0.0
 Identities = 377/377 (100%)
 Strand = Plus / Plus

                                                                        
Query: 182  tgcagaaagagttttggctgcaagtaatccaactgcacaaaagagcaggcctcatacttt 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827  tgcagaaagagttttggctgcaagtaatccaactgcacaaaagagcaggcctcatacttt 886

                                                                        
Query: 242  atttgctagtgggcctccaacactcgcaggtgctcctcaggctaatggcaccattgctgc 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887  atttgctagtgggcctccaacactcgcaggtgctcctcaggctaatggcaccattgctgc 946

                                                                        
Query: 302  accagtgcctccgcgcccctttgcgaatggggttgctccacccgccctacgtcaaccacc 361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947  accagtgcctccgcgcccctttgcgaatggggttgctccacccgccctacgtcaaccacc 1006

                                                                        
Query: 362  tccgcctcaagctgcacccttccagcctatgccgggacaaccaacatggcatcaacagca 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 tccgcctcaagctgcacccttccagcctatgccgggacaaccaacatggcatcaacagca 1066

                                                                        
Query: 422  gccaggtcaattaccaccacccacaatgcctccacctcagtaccagcagttcaggccacc 481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 gccaggtcaattaccaccacccacaatgcctccacctcagtaccagcagttcaggccacc 1126

                                                                        
Query: 482  tccctctggtatgcagatgcctccacctccacaaggtgttccaggtcctccaaggcatct 541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1127 tccctctggtatgcagatgcctccacctccacaaggtgttccaggtcctccaaggcatct 1186

                             
Query: 542  tccaccgccagcagtaa 558
            |||||||||||||||||
Sbjct: 1187 tccaccgccagcagtaa 1203



 Score =  180 bits (91), Expect = 6e-45
 Identities = 91/91 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaatggacaatatctttgcaatcgccaaattacagtgtcatatgcttataaaaaggac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgaatggacaatatctttgcaatcgccaaattacagtgtcatatgcttataaaaaggac 800

                                          
Query: 61  accaaaggtgaaaggcatggtactcctgcag 91
           |||||||||||||||||||||||||||||||
Sbjct: 801 accaaaggtgaaaggcatggtactcctgcag 831