Miyakogusa Predicted Gene

Lj0g3v0253489.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0253489.1 Non Chatacterized Hit- tr|I1P4A2|I1P4A2_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3
SV=1,39.23,1e-16,seg,NULL; AAA-FAMILY ATPASE,NULL; AAA
ATPASE,NULL,CUFF.16634.1
         (516 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO013029 weakly similar to UniRef100_A7P2W5 Cluster: Ch...   892   0.0  
gnl|LJGI|AV778703 weakly similar to UniRef100_A7P2W5 Cluster: Ch...   200   6e-51

>gnl|LJGI|GO013029 weakly similar to UniRef100_A7P2W5 Cluster: Chromosome chr1
           scaffold_5, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 754

 Score =  892 bits (450), Expect = 0.0
 Identities = 501/510 (98%), Gaps = 6/510 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtacttgaggagaatactgtgcactcatcggagatggcatcttttagcttcagattca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atgtacttgaggagaatactgtgcactcatcggagatggcatcttttagcttcagattca 310

                                                                       
Query: 61  tctagacacactttttctggtctgggccaaaggtgtactcagttacatgcttacatcgat 120
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tctggacacactttttctggtctgggccaaaggtgtactcagttacatgcttacatcgat 370

                                                                       
Query: 121 gcaagtataaataaacaaaacaagtctcaggtgcagcagcatcaacaggaatggctcagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gcaagtataaataaacaaaacaagtctcaggtgcagcagcatcaacaggaatggctcagg 430

                                                                       
Query: 181 cgagaatcaccggttttgacaagaagagataagtttaaaattcagattttgacaagaatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cgagaatcaccggttttgacaagaagagataagtttaaaattcagattttgacaagaatt 490

                                                                       
Query: 241 cttccgtgggagaacattaacgtctcttgggacacttttccatatcccatagatgagcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cttccgtgggagaacattaacgtctcttgggacacttttccatatcccatagatgagcat 550

                                                                       
Query: 301 acaaaaagtcttctggtggaatttgctgattcacacttgagatataataagtttgcttca 360
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 551 acaaaaagtcttctggtggaatttactgattcacacttgagatataataagtttgcttca 610

                                                                       
Query: 361 tcttttggtactggccttgcatcttcaagtggaagaatattgcttcagagtattcccggc 420
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 611 tcttttggtactggccttgcatcttcaagtgggagaatattgcttcagagtattcccggc 670

                                                                       
Query: 421 actgagctttatcaggagagattagttagagctcttgcacaacatttacaagttcctttg 480
           |||||||||||||| |||||| |||||||||||||||||| |||||||| ||||||||||
Sbjct: 671 actgagctttatca-gagaga-tagttagagctcttgcac-acatttac-agttcctttg 726

                                         
Query: 481 ttggtgtttgatagaagcatccttactcct 510
            ||||||||||||| |||||||||||||||
Sbjct: 727 -tggtgtttgatag-agcatccttactcct 754


>gnl|LJGI|AV778703 weakly similar to UniRef100_A7P2W5 Cluster: Chromosome chr1
           scaffold_5, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (16%)
          Length = 603

 Score =  200 bits (101), Expect = 6e-51
 Identities = 194/225 (86%)
 Strand = Plus / Minus

                                                                       
Query: 182 gagaatcaccggttttgacaagaagagataagtttaaaattcagattttgacaagaattc 241
           ||||||| ||| |||||||||||||||||||||| | || | || |||||| ||||||| 
Sbjct: 263 gagaatcgccgtttttgacaagaagagataagttcagaactgagtttttgagaagaattg 204

                                                                       
Query: 242 ttccgtgggagaacattaacgtctcttgggacacttttccatatcccatagatgagcata 301
           ||||||||||||| || ||||| ||||||||||| ||||| |||| |||  |||||||||
Sbjct: 203 ttccgtgggagaaaataaacgtttcttgggacacatttccttatcacattcatgagcata 144

                                                                       
Query: 302 caaaaagtcttctggtggaatttgctgattcacacttgagatataataagtttgcttcat 361
           |||||||||||||| |||||| ||||| |||||| |||||| ||||||||||| ||||| 
Sbjct: 143 caaaaagtcttctgatggaatgtgctgcttcacatttgagacataataagtttacttcaa 84

                                                        
Query: 362 cttttggtactggccttgcatcttcaagtggaagaatattgcttc 406
           | |||||||||  |||  | ||||||||| |||||||||||||||
Sbjct: 83  cctttggtactcacctcacttcttcaagtcgaagaatattgcttc 39



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 40  catcttttagcttcagattcatctagacacactttttctggtctgggccaaaggtgta 97
           |||||| ||| |||| ||||||||||| ||| |||||||||||||| || ||||||||
Sbjct: 555 catcttctaggttcatattcatctagaaacagtttttctggtctggacccaaggtgta 498