Miyakogusa Predicted Gene

Lj0g3v0253409.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0253409.1 Non Chatacterized Hit- tr|J3L4R8|J3L4R8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G4,53.85,0.00000000000003,GH3,GH3 auxin-responsive promoter;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.16720.1
         (1000 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57527 similar to UniRef100_A7P139 Cluster: Chromosome...  1695   0.0  

>gnl|LJGI|TC57527 similar to UniRef100_A7P139 Cluster: Chromosome chr19 scaffold_4,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr19 scaffold_4, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (60%)
          Length = 1329

 Score = 1695 bits (855), Expect = 0.0
 Identities = 855/855 (100%)
 Strand = Plus / Plus

                                                                        
Query: 16   agctctgggacatctggtggtgagagaaagctgatgcctacaattgaagatgagctaggg 75
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475  agctctgggacatctggtggtgagagaaagctgatgcctacaattgaagatgagctaggg 534

                                                                        
Query: 76   aggaggactttgctttatagcttgttgatgccggtgatgagccagtttgtccctgattta 135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535  aggaggactttgctttatagcttgttgatgccggtgatgagccagtttgtccctgattta 594

                                                                        
Query: 136  gaaaaagggaaaggaatgtacctattgttcataaaatctgaagcaaaaacacctggaggc 195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595  gaaaaagggaaaggaatgtacctattgttcataaaatctgaagcaaaaacacctggaggc 654

                                                                        
Query: 196  attgttgctcgtccagttctaacaagctattacaaaagttcccattttagggacagaccc 255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655  attgttgctcgtccagttctaacaagctattacaaaagttcccattttagggacagaccc 714

                                                                        
Query: 256  tatgacccttacaccaactacacaagcccaaatgagactgtcctctgtcctgattcctac 315
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715  tatgacccttacaccaactacacaagcccaaatgagactgtcctctgtcctgattcctac 774

                                                                        
Query: 316  caaagcatgtattcccaattgctctgtggcctttgccaaaacaaagaagtgttccgtgta 375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775  caaagcatgtattcccaattgctctgtggcctttgccaaaacaaagaagtgttccgtgta 834

                                                                        
Query: 376  ggtgctgttttcgcctctggtttcataagggccattcggttccttgagaaacactggcca 435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835  ggtgctgttttcgcctctggtttcataagggccattcggttccttgagaaacactggcca 894

                                                                        
Query: 436  ctcctttgcaatgatatcagaactggaaccatcaaccccaccataatcactgatgcttca 495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895  ctcctttgcaatgatatcagaactggaaccatcaaccccaccataatcactgatgcttca 954

                                                                        
Query: 496  gtgagagaggcggtctccaagatcgtcaaaccggacccgaagctggcggatttcattgaa 555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955  gtgagagaggcggtctccaagatcgtcaaaccggacccgaagctggcggatttcattgaa 1014

                                                                        
Query: 556  gctgagtgtagcaagaggtcatggcagggtataattaccaggctgtggcctaacaccaag 615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 gctgagtgtagcaagaggtcatggcagggtataattaccaggctgtggcctaacaccaag 1074

                                                                        
Query: 616  tatgtggatgttattgtgacaggaacaatgtcacaatacatccccatacttgatcactac 675
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 tatgtggatgttattgtgacaggaacaatgtcacaatacatccccatacttgatcactac 1134

                                                                        
Query: 676  agcaatggactccctcttgtgtgcactatgtatgcttctagtgagtgctactttggggtt 735
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 agcaatggactccctcttgtgtgcactatgtatgcttctagtgagtgctactttggggtt 1194

                                                                        
Query: 736  aacctcaaccctctttgcaaacccagtgaggtttcttacaccctcatccccaccatgtgc 795
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 aacctcaaccctctttgcaaacccagtgaggtttcttacaccctcatccccaccatgtgc 1254

                                                                        
Query: 796  tactttgagttcttgcctgtcaacagaaccaatggtgtcactgattccattcagacaccc 855
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 tactttgagttcttgcctgtcaacagaaccaatggtgtcactgattccattcagacaccc 1314

                           
Query: 856  agatccctcaatgag 870
            |||||||||||||||
Sbjct: 1315 agatccctcaatgag 1329