Miyakogusa Predicted Gene
- Lj0g3v0253159.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0253159.1 Non Chatacterized Hit- tr|I1KYP5|I1KYP5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,27.16,2e-18,no
description,DNA-binding pseudobarrel domain; seg,NULL; DNA-binding
pseudobarrel domain,DNA-bindin,CUFF.16618.1
(1356 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC596542 weakly similar to UniRef100_A2Q2N6 Cluster: Tr... 133 3e-30
gnl|LJGI|TC73841 similar to UniRef100_A7P9A4 Cluster: Chromosome... 129 5e-29
gnl|LJGI|TC82071 weakly similar to UniRef100_A2Q2N6 Cluster: Tra... 92 1e-17
gnl|LJGI|TC79583 similar to UniRef100_A7P9A4 Cluster: Chromosome... 78 2e-13
gnl|LJGI|TC78770 weakly similar to UniRef100_A9SGA4 Cluster: Pre... 72 1e-11
>gnl|LJGI|DC596542 weakly similar to UniRef100_A2Q2N6 Cluster: Transcriptional factor
B3; n=1; Medicago truncatula|Rep: Transcriptional factor
B3 - Medicago truncatula (Barrel medic), partial (20%)
Length = 409
Score = 133 bits (67), Expect = 3e-30
Identities = 237/293 (80%), Gaps = 3/293 (1%)
Strand = Plus / Plus
Query: 28 tctgcaattcgtttctttaagattatcacaacaagaagtcttgaagctggaaaacttatg 87
|||||||| ||||||||||||| |||||||||| | | |||||||||||||||||| |
Sbjct: 120 tctgcaatctgtttctttaagatcatcacaacaacatgcattgaagctggaaaacttaag 179
Query: 88 cttccaaatggtttcactagggaacatggtggtgatgtgtcaaacccagtgtttctcaag 147
|| ||||||||||||| || | || | |||||||| || |||||||||| ||||||||
Sbjct: 180 ctcccaaatggtttcattaagaaatacagtggtgatatgccaaacccagtaattctcaag 239
Query: 148 cctccagatgacaaagactggaagatacattggactaaacatgaagatggctatatttgg 207
|| || ||| ||| ||| |||||||||||| ||||||||| || ||||||||
Sbjct: 240 ccccctgataacactagttgggagatacattggagtaaacatgattctg---atatttgg 296
Query: 208 tttgaaaagggttggaaagaatttgcttcatactactcccttgatcatgggtacttgctg 267
||| ||||||||||| |||||||||| ||| |||||||| | |||||| ||||| |
Sbjct: 297 tttcaaaagggttgggaagaatttgcgaaatattactccctctaccatgggcacttggtt 356
Query: 268 ttgtttgaatacaacaaacattctgattttggggtacacatatttgacaagag 320
|||||||||| ||| | |||| |||||||||| || ||||||||||||||
Sbjct: 357 ttgtttgaattcaaggatgcttctcattttggggtgcatatatttgacaagag 409
>gnl|LJGI|TC73841 similar to UniRef100_A7P9A4 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (6%)
Length = 480
Score = 129 bits (65), Expect = 5e-29
Identities = 111/125 (88%), Gaps = 6/125 (4%)
Strand = Plus / Plus
Query: 1224 caagttgtcaaaaggttgggcccgatttgcaagagaaagtaaattgctggttggagatgt 1283
||||||||| ||||||||||||| ||||||| |||||||||||||| | | |||||||||
Sbjct: 200 caagttgtccaaaggttgggccctatttgcaggagaaagtaaattggtagctggagatgt 259
Query: 1284 ttgtgtctttgaactcatcaacaaggaagaagatgctcctgtgtttcatgttcatatttt 1343
|||||||||||| |||||||||| ||||||||| |||||||| |||||||||||||
Sbjct: 260 ttgtgtctttgagctcatcaaca---aagaagatg---ctgtgtttgatgttcatatttt 313
Query: 1344 caaag 1348
|||||
Sbjct: 314 caaag 318
>gnl|LJGI|TC82071 weakly similar to UniRef100_A2Q2N6 Cluster: Transcriptional factor
B3; n=1; Medicago truncatula|Rep: Transcriptional factor
B3 - Medicago truncatula (Barrel medic), partial (24%)
Length = 744
Score = 91.7 bits (46), Expect = 1e-17
Identities = 235/296 (79%), Gaps = 4/296 (1%)
Strand = Plus / Plus
Query: 39 tttctttaagattatcacaacaagaagtcttgaagc-tggaaaacttatgcttccaaatg 97
|||||||||||| |||||||| | |||| ||||||| |||| | |||| | |||||||
Sbjct: 113 tttctttaagatcatcacaacgacaagtattgaagcgtggagagcttaggattccaaaca 172
Query: 98 gtttcactagggaacatggtggtgatgtgtcaaacccagtgtttctcaagcctccagatg 157
|||||||| | | ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 173 atttcactaagacatatggtggtgatatgtcaaacccaatgtttctcaagcctccagatg 232
Query: 158 acaaagactggaagatacattggactaaacatgaagatggctatatttggtttgaaaagg 217
| || ||| | ||| | | |||| | ||||| || |||||||| |||| |
Sbjct: 233 gaactgaatggcaaatatgtcatagtaaaact---gatggggatgtttggtttcaaaatg 289
Query: 218 gttggaaagaatttgcttcatactactcccttgatcatgggtacttgctgttgtttgaat 277
|||||||||| ||||| ||| |||||||| ||||| || || || ||||||||||||
Sbjct: 290 gttggaaagattttgcgaaatattactccctcgatcacggacacatggtgttgtttgaat 349
Query: 278 acaacaaacattctgattttggggtacacatatttgacaagagtacccttgaaata 333
|||| | |||| ||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 350 acaaggattcttctcattttggggtacatatatttgataagagcacccttgaaata 405
>gnl|LJGI|TC79583 similar to UniRef100_A7P9A4 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (6%)
Length = 516
Score = 77.8 bits (39), Expect = 2e-13
Identities = 108/127 (85%), Gaps = 8/127 (6%)
Strand = Plus / Plus
Query: 1224 caagttgtcaaaaggttgggcccgatttgcaag-agaaagtaaattgctggt-tggagat 1281
||||||||| |||||||||||| |||||| || ||||||||||||| | | |||||||
Sbjct: 245 caagttgtcctaaggttgggccctatttgccaggagaaagtaaattggtagcctggagat 304
Query: 1282 gtttgtgtctttgaactcatcaacaaggaagaagatgctcctgtgtttcatgttcatatt 1341
|||||||||||||| |||||| || ||||||||| |||||||| |||||||||||
Sbjct: 305 gtttgtgtctttgagctcatccac---caagaagatg---ctgtgtttgatgttcatatt 358
Query: 1342 ttcaaag 1348
|||||||
Sbjct: 359 ttcaaag 365
>gnl|LJGI|TC78770 weakly similar to UniRef100_A9SGA4 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(17%)
Length = 516
Score = 71.9 bits (36), Expect = 1e-11
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 1222 ggcaagttgtcaaaaggttgggcccgatttgcaagagaaagtaaattgctggttggagat 1281
||||||||||| ||||||||| | |||||| || ||||||||||| | |||||||||
Sbjct: 213 ggcaagttgtcccaaggttgggtcgaatttgctggaaaaagtaaattggtagttggagat 272
Query: 1282 gtttgtgtctttgaactcatcaacaaggaaga 1313
| |||||| ||||| |||||||| ||||||||
Sbjct: 273 gcttgtgtgtttgagctcatcaataaggaaga 304