Miyakogusa Predicted Gene
- Lj0g3v0253109.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0253109.1 Non Chatacterized Hit- tr|I1K6T2|I1K6T2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51850
PE,81.54,0,Prokaryotic type KH domain (KH-domain type II),K Homology,
prokaryotic type; no description,K homolo,gene.g19755.t1.1
(675 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72914 similar to UniRef100_Q56YP4 Cluster: ARF1-bindi... 654 0.0
gnl|LJGI|TC66053 homologue to UniRef100_A7PHQ5 Cluster: Chromoso... 222 2e-57
gnl|LJGI|GO020596 homologue to UniRef100_A7PDZ8 Cluster: Chromos... 184 5e-46
gnl|LJGI|TC58682 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 184 5e-46
gnl|LJGI|TC70085 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 92 5e-18
gnl|LJGI|TC57325 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 86 3e-16
gnl|LJGI|TC67712 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 84 1e-15
>gnl|LJGI|TC72914 similar to UniRef100_Q56YP4 Cluster: ARF1-binding protein; n=1;
Arabidopsis thaliana|Rep: ARF1-binding protein -
Arabidopsis thaliana (Mouse-ear cress), partial (11%)
Length = 586
Score = 654 bits (330), Expect = 0.0
Identities = 364/381 (95%)
Strand = Plus / Plus
Query: 1 atggcgacatcggaggtaacgaacaagggaaattctgtgaacggaatgggtgacaccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 atggcgacatcggaggtaacgaacaagggaaattctgtgaacggaatgggtgacaccaac 249
Query: 61 tnnnnnnnnnnnnnnnnngatggtagtagaaacggtgcaggagagggtcagagtggttca 120
| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tacaacaacaacaacaacgatggtagtagaaacggtgcaggagagggtcagagtggttca 309
Query: 121 tcatcgtcaccgacgagagatgcggaaactgcactttacagggagctatggcatgcttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tcatcgtcaccgacgagagatgcggaaactgcactttacagggagctatggcatgcttgt 369
Query: 181 gctggtcctctggttactgtgccaagagaaggagagcgcgtcttctattttcctcaggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gctggtcctctggttactgtgccaagagaaggagagcgcgtcttctattttcctcaggga 429
Query: 241 cacattgaacaggtggaggcatcgacgaatcaggtagcggaactacacatgcctgtttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cacattgaacaggtggaggcatcgacgaatcaggtagcggaactacacatgcctgtttac 489
Query: 301 gatctcccacccaagatcttgtgtcgggtcatcaacgtgatgctcaaggcggagccagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gatctcccacccaagatcttgtgtcgggtcatcaacgtgatgctcaaggcggagccagac 549
Query: 361 acagatgaggtgtttgctcag 381
|||||||||||||||||||||
Sbjct: 550 acagatgaggtgtttgctcag 570
>gnl|LJGI|TC66053 homologue to UniRef100_A7PHQ5 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (31%)
Length = 1177
Score = 222 bits (112), Expect = 2e-57
Identities = 214/248 (86%)
Strand = Plus / Plus
Query: 134 cgagagatgcggaaactgcactttacagggagctatggcatgcttgtgctggtcctctgg 193
||||||| |||||| |||| || ||||||||||||||||||||||||||||||||||| |
Sbjct: 355 cgagagacgcggaagctgcgctgtacagggagctatggcatgcttgtgctggtcctcttg 414
Query: 194 ttactgtgccaagagaaggagagcgcgtcttctattttcctcagggacacattgaacagg 253
| || |||||| | |||||||| || |||||||| || ||||||||||| ||||||||||
Sbjct: 415 tgacggtgccacgggaaggagaacgagtcttctacttccctcagggacatattgaacagg 474
Query: 254 tggaggcatcgacgaatcaggtagcggaactacacatgcctgtttacgatctcccaccca 313
||||||| || ||||||||||| ||||| || ||||| ||||||||||||||| | |
Sbjct: 475 tggaggcttcaacgaatcaggtggcggacgagcatatgccggtttacgatctcccatcta 534
Query: 314 agatcttgtgtcgggtcatcaacgtgatgctcaaggcggagccagacacagatgaggtgt 373
||||| | || ||||||||||||||| ||| ||||||||||| || || ||||||||||
Sbjct: 535 agatcctatgccgggtcatcaacgtgcagctgaaggcggagccggatacggatgaggtgt 594
Query: 374 ttgctcag 381
||||||||
Sbjct: 595 ttgctcag 602
>gnl|LJGI|GO020596 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (56%)
Length = 518
Score = 184 bits (93), Expect = 5e-46
Identities = 182/215 (84%), Gaps = 15/215 (6%)
Strand = Plus / Plus
Query: 391 gatgggtactccggtgtggaggttagagttaccacgatgaaaaccgagattatcatcaga 450
||||| ||||| |||||||||||||| |||||| |||||||||||||||| |||||||||
Sbjct: 220 gatggatactctggtgtggaggttagggttaccccgatgaaaaccgagatcatcatcaga 279
Query: 451 gccactcgaactcaggccgttttcgatgggtcattatcatatgagaagggaaagagaatt 510
|||||||||||||| |||||| ||| || ||||||||| ||| |||
Sbjct: 280 gccactcgaactcaagccgttctcggtg---------------agaagggaaggaggatt 324
Query: 511 cgggaacttacctctgtggtgcagaagaggtttaagtttcctaagaacaacgttgaactc 570
|||| |||||||||||||||||||||||||||||||||||| |||||| ||||| |||
Sbjct: 325 agggagcttacctctgtggtgcagaagaggtttaagtttcctgagaacagtgttgagctc 384
Query: 571 tatgctgagaaggttaacaatagggggctttgtgc 605
||||||||||||||||| || ||||||||||||||
Sbjct: 385 tatgctgagaaggttaataacagggggctttgtgc 419
>gnl|LJGI|TC58682 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (95%)
Length = 1079
Score = 184 bits (93), Expect = 5e-46
Identities = 182/215 (84%), Gaps = 15/215 (6%)
Strand = Plus / Plus
Query: 391 gatgggtactccggtgtggaggttagagttaccacgatgaaaaccgagattatcatcaga 450
||||| ||||| |||||||||||||| |||||| |||||||||||||||| |||||||||
Sbjct: 177 gatggatactctggtgtggaggttagggttaccccgatgaaaaccgagatcatcatcaga 236
Query: 451 gccactcgaactcaggccgttttcgatgggtcattatcatatgagaagggaaagagaatt 510
|||||||||||||| |||||| ||| || ||||||||| ||| |||
Sbjct: 237 gccactcgaactcaagccgttctcggtg---------------agaagggaaggaggatt 281
Query: 511 cgggaacttacctctgtggtgcagaagaggtttaagtttcctaagaacaacgttgaactc 570
|||| |||||||||||||||||||||||||||||||||||| |||||| ||||| |||
Sbjct: 282 agggagcttacctctgtggtgcagaagaggtttaagtttcctgagaacagtgttgagctc 341
Query: 571 tatgctgagaaggttaacaatagggggctttgtgc 605
||||||||||||||||| || ||||||||||||||
Sbjct: 342 tatgctgagaaggttaataacagggggctttgtgc 376
>gnl|LJGI|TC70085 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), complete
Length = 1176
Score = 91.7 bits (46), Expect = 5e-18
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 492 tgagaagggaaagagaattcgggaacttacctctgtggtgcagaagaggtttaagtttcc 551
||||||||||| ||||||| |||| |||||||| | || ||||||||||| ||||||||
Sbjct: 294 tgagaagggaaggagaattagggagcttacctcaattgtacagaagaggttcaagtttcc 353
Query: 552 taagaacaacgttgaactctatgctgagaaggttaacaatagggggctttgtgc 605
| |||| || || |||||||||||||||||||| || || || ||||| |||||
Sbjct: 354 tgagaataatgtggaactctatgctgagaaggtgaataacagagggctctgtgc 407
>gnl|LJGI|TC57325 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (95%)
Length = 1025
Score = 85.7 bits (43), Expect = 3e-16
Identities = 165/209 (78%), Gaps = 15/209 (7%)
Strand = Plus / Plus
Query: 397 tactccggtgtggaggttagagttaccacgatgaaaaccgagattatcatcagagccact 456
|||||||||||||||||||| ||||| || ||||||| ||||| |||||||||||||||
Sbjct: 179 tactccggtgtggaggttagggttactccggtgaaaactgagatcatcatcagagccact 238
Query: 457 cgaactcaggccgttttcgatgggtcattatcatatgagaagggaaagagaattcgggaa 516
||||| || |||||| | | || ||||||| | ||||||| ||||
Sbjct: 239 cgaacccaagccgttctaggtg---------------agaagggtaggagaattagggag 283
Query: 517 cttacctctgtggtgcagaagaggtttaagtttcctaagaacaacgttgaactctatgct 576
|||||||| ||||| ||||||||| ||||||||| | |||| || ||||||||||||
Sbjct: 284 cttacctcagtggtatcgaagaggttcaagtttcctgaaaacagtgtggaactctatgct 343
Query: 577 gagaaggttaacaatagggggctttgtgc 605
|| ||||||||||| || || ||||||||
Sbjct: 344 gaaaaggttaacaacagaggcctttgtgc 372
>gnl|LJGI|TC67712 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (36%)
Length = 903
Score = 83.8 bits (42), Expect = 1e-15
Identities = 96/114 (84%)
Strand = Plus / Plus
Query: 492 tgagaagggaaagagaattcgggaacttacctctgtggtgcagaagaggtttaagtttcc 551
||||||||||| ||||||| |||| ||||||| ||||| ||||||||| ||||||||
Sbjct: 186 tgagaagggaaggagaattagggagcttaccttagtggtatcgaagaggttcaagtttcc 245
Query: 552 taagaacaacgttgaactctatgctgagaaggttaacaatagggggctttgtgc 605
| | |||| || |||||||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 246 tgaaaacagtgtagaactctatgctgaaaaggtcaacaacaggggcctttgtgc 299