Miyakogusa Predicted Gene
- Lj0g3v0253079.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0253079.1 CUFF.16619.1
(2745 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO021708 weakly similar to UniRef100_A7P0P0 Cluster: Ch... 1312 0.0
gnl|LJGI|TC73028 similar to UniRef100_A7QPC5 Cluster: Chromosome... 404 e-111
gnl|LJGI|BP038570 similar to UniRef100_A7P0P0 Cluster: Chromosom... 228 1e-58
gnl|LJGI|BW600546 similar to UniRef100_Q92SW4 Cluster: Translati... 58 3e-07
>gnl|LJGI|GO021708 weakly similar to UniRef100_A7P0P0 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 688
Score = 1312 bits (662), Expect = 0.0
Identities = 671/674 (99%)
Strand = Plus / Plus
Query: 1999 attaacataaatagacggatgacctgtccatcatcggaaagtacatcaagccaaacaggc 2058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 attaacataaatagacggatgacctgtccatcatcggaaagtacatcaagccaaacaggc 61
Query: 2059 agagctgctccctttgctgcccatgggcaagagcagactctcagcgatccggttcagctg 2118
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agagctgctctctttgctgcccatgggcaagagcagactctcagcgatccggttcagctg 121
Query: 2119 atgaggatgttagctgaaaaggctcaaaagcaacagacttctagttcttctaatcattcc 2178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atgaggatgttagctgaaaaggctcaaaagcaacagacttctagttcttctaatcattcc 181
Query: 2179 cctgcggatactccaccagtaacaccatcggttccatcaagtcgtcgagaagactcaggc 2238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cctgcggatactccaccagtaacaccatcggttccatcaagtcgtcgagaagactcaggc 241
Query: 2239 aatgctgcagcggcggctgcgcgtgcatggatgtctgtaggggcagccggatttaaacaa 2298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aatgctgcagcggcggctgcgcgtgcatggatgtctgtaggggcagccggatttaaacaa 301
Query: 2299 ggacctgacaattctagttctcccaagaaccagaattctgcagattcattgtataacccg 2358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggacctgacaattctagttctcccaagaaccagaattctgcagattcattgtataacccg 361
Query: 2359 gctcgagagttccatcagcacatgtcacgaattaggggcgagtcagagttccatcagcac 2418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gctcgagagttccatcagcacatgtcacgaattaggggcgagtcagagttccatcagcac 421
Query: 2419 atgtcacaaatgcctttccagcctgagaagaacaattttccatttcaggcacttggaccc 2478
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 422 atgtcacaaatgcctttccagcctgagaagaacaattttccacttcaggcacttggaccc 481
Query: 2479 caacctatccacggtcacacagttggggtttcgcagtttccgaaccggcctatggttttc 2538
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caacctacccacggtcacacagttggggtttcgcagtttccgaaccggcctatggttttc 541
Query: 2539 cctcaagtggcagcttctgatctatcaagatttaaaatgcagccgccttggcgaggtgtc 2598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cctcaagtggcagcttctgatctatcaagatttaaaatgcagccgccttggcgaggtgtc 601
Query: 2599 cgacctcaaaatcaaccaagacagaaacaagaatcacttcctcctgacttgaacattggt 2658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cgacctcaaaatcaaccaagacagaaacaagaatcacttcctcctgacttgaacattggt 661
Query: 2659 ttccattcacctgg 2672
||||||||||||||
Sbjct: 662 ttccattcacctgg 675
>gnl|LJGI|TC73028 similar to UniRef100_A7QPC5 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 735
Score = 404 bits (204), Expect = e-111
Identities = 204/204 (100%)
Strand = Plus / Plus
Query: 452 gggttgttgttgttgaggtaaagggcagaaaagtggattctaaagggctccactctggtt 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gggttgttgttgttgaggtaaagggcagaaaagtggattctaaagggctccactctggtt 591
Query: 512 caggaactccttcgaaggttgcttatgtgattccattacctgataagaggaccctggaat 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 caggaactccttcgaaggttgcttatgtgattccattacctgataagaggaccctggaat 651
Query: 572 tgatccttgacaaacttcagaagaaggacacatatggcgtgtatgcggagccagttgatc 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 tgatccttgacaaacttcagaagaaggacacatatggcgtgtatgcggagccagttgatc 711
Query: 632 cagaagagctccctgattatcacg 655
||||||||||||||||||||||||
Sbjct: 712 cagaagagctccctgattatcacg 735
Score = 313 bits (158), Expect = 3e-84
Identities = 158/158 (100%)
Strand = Plus / Plus
Query: 1 atgatgggtcagatcgtgcgtaggaagaagaagggtcgtccttccaaggcagatctagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 atgatgggtcagatcgtgcgtaggaagaagaagggtcgtccttccaaggcagatctagct 139
Query: 61 cgccgctccgccaacgccaactctccggcgacgactgcacagtccactctccgtcgcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 cgccgctccgccaacgccaactctccggcgacgactgcacagtccactctccgtcgcagc 199
Query: 121 cgccgcccgagaaatgtcaggtacaacatcgattacct 158
||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cgccgcccgagaaatgtcaggtacaacatcgattacct 237
Score = 246 bits (124), Expect = 6e-64
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 217 aagaagaagctcaagctggttgagaagctgaaccagggggtggaggaagaggaagaagat 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aagaagaagctcaagctggttgagaagctgaaccagggggtggaggaagaggaagaagat 356
Query: 277 gaggaggatgaagaggagcaaacgccgcatcccactcgcggaaggtcgcgtgtggagcac 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gaggaggatgaagaggagcaaacgccgcatcccactcgcggaaggtcgcgtgtggagcac 416
Query: 337 gcgc 340
||||
Sbjct: 417 gcgc 420
>gnl|LJGI|BP038570 similar to UniRef100_A7P0P0 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 566
Score = 228 bits (115), Expect = 1e-58
Identities = 433/539 (80%)
Strand = Plus / Plus
Query: 917 tggtgaagaagctagcaaagaaaccgctgggtcatgcttcacaggaacctgttggctctg 976
|||| |||||||||| |||||| || |||||| ||||||||||||||||||||||||||
Sbjct: 1 tggttaagaagctagtaaagaagccactgggttgtgcttcacaggaacctgttggctctg 60
Query: 977 atttctcctcaggtgcaactcttgctactattggagatgtgcagccgatttcccatgcaa 1036
||||||||||||| || |||||||| |||||||||||||||||||| |||| ||| |||
Sbjct: 61 atttctcctcaggggccactcttgcgactattggagatgtgcagccaatttttcatccaa 120
Query: 1037 ttcaaggcatcatctttgaaagacctggcaacattgatggccttgtggaggggaatgctt 1096
| ||| | | || || || |||||||| ||||||| | | ||||||||| |||
Sbjct: 121 tgcaacatgttagctatgggaggtctggcaactttgatggtatcatagaggggaatactt 180
Query: 1097 tctcaattgatgttaatcaagagaaagcagacgactttttatcagggaggggtactctct 1156
||| || |||| |||||||||||||| || ||| |||| ||||||| ||| ||||
Sbjct: 181 tcttcatcgatgcaaatcaagagaaagctgaggacgttttgtcagggaagggcctgctct 240
Query: 1157 ccaagttgggaaggaagtcatctgtacaagactttgaacatcgtgctacttacaatatgt 1216
| || |||||||||||||| | ||| | || | | |||||| |||| |||||||
Sbjct: 241 ctaaattgggaaggaagtcctttgtgcttgatgacaatcgtcgtgcatcttataatatgt 300
Query: 1217 ccaatctaccagccaccagatctgattcaatatttacgacatttgagggtgaaattaagc 1276
| | | |||| || ||||| |||||| |||||| | | |||||| ||| ||| ||||
Sbjct: 301 ctatgcaaccaattactagatcagattcagtatttatgtcctttgagagtggaatgaagc 360
Query: 1277 agctagttactgtcggacttcaagctgaatattcctatgccaggagtttggctcgttttg 1336
|||| |||||||| || ||||| || |||||||| ||||| ||||||||||||||||||
Sbjct: 361 agctggttactgttgggcttcatgccgaatattcttatgctaggagtttggctcgtttta 420
Query: 1337 ctgctactctaggaccaacagcttggagagttgcttcccaaaggattcagcaggcactgc 1396
|||| |||||||||| | ||||||| | |||||||||| |||||||| |||| |||||
Sbjct: 421 gtgcttctctaggacccattgcttggaaaattgcttcccacaggattcaacaggtactgc 480
Query: 1397 catctggttgtaaatttggtcgtggttgggtgggagaatacgaaccgcttccaacccca 1455
|| |||| | ||||||||||||||| ||||| ||||| | |||| |||||||||||||
Sbjct: 481 cagctggctctaaatttggtcgtggctgggttggagagtttgaacagcttccaacccca 539
>gnl|LJGI|BW600546 similar to UniRef100_Q92SW4 Cluster: Translation initiation factor
IF-2; n=1; Sinorhizobium meliloti|Rep: Translation
initiation factor IF-2 - Rhizobium meliloti
(Sinorhizobium meliloti), partial (3%)
Length = 436
Score = 58.0 bits (29), Expect = 3e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 468 ggtaaagggcagaaaagtggattctaaagggctccactctg 508
||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 396 ggtaaagggtagaaaagtggatttgaaagggctccactctg 436