Miyakogusa Predicted Gene

Lj0g3v0252799.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0252799.2 Non Chatacterized Hit- tr|E9B399|E9B399_LEIMU
Putative uncharacterized protein OS=Leishmania
mexican,52.63,6.5,seg,NULL,CUFF.16600.2
         (262 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67312                                                      321   1e-87
gnl|LJGI|TC68445 similar to UniRef100_A7P7X0 Cluster: Chromosome...   281   1e-75

>gnl|LJGI|TC67312 
          Length = 591

 Score =  321 bits (162), Expect = 1e-87
 Identities = 162/162 (100%)
 Strand = Plus / Plus

                                                                       
Query: 101 taacccgaaccagagaagcttcatcacgtcccacaactacgcaatctgaactcacgatgg 160
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  taacccgaaccagagaagcttcatcacgtcccacaactacgcaatctgaactcacgatgg 126

                                                                       
Query: 161 tggaggtcgtcaagcttcatcttcgacctccattggtgacgtcgaagccagtgtgcgaag 220
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tggaggtcgtcaagcttcatcttcgacctccattggtgacgtcgaagccagtgtgcgaag 186

                                                     
Query: 221 gagaagactctgtgactgtggggttcaagctccattggtgac 262
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gagaagactctgtgactgtggggttcaagctccattggtgac 228


>gnl|LJGI|TC68445 similar to UniRef100_A7P7X0 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 564

 Score =  281 bits (142), Expect = 1e-75
 Identities = 157/162 (96%)
 Strand = Plus / Plus

                                                                       
Query: 101 taacccgaaccagagaagcttcatcacgtcccacaactacgcaatctgaactcacgatgg 160
           |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 45  taactcgaaccagagaagcttcatgacgtcccacaactacgcaatctgaactcacgatgg 104

                                                                       
Query: 161 tggaggtcgtcaagcttcatcttcgacctccattggtgacgtcgaagccagtgtgcgaag 220
           ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 105 tggaggttgtcaagcttcatcttcgacctccattggtgacgtcgaagctagtgtgcgaag 164

                                                     
Query: 221 gagaagactctgtgactgtggggttcaagctccattggtgac 262
           ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 165 gagaagactctgtgactgtggggttaaagctccattggtgac 206