Miyakogusa Predicted Gene

Lj0g3v0252369.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0252369.1 Non Chatacterized Hit- tr|I1MHB5|I1MHB5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,81.7,0,NFYA_HAP2_1,CCAAT-binding factor, conserved site;
TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED,CCAAT-bind,CUFF.16553.1
         (471 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57894 similar to UniRef100_O49915 Cluster: RAPB prote...   932   0.0  

>gnl|LJGI|TC57894 similar to UniRef100_O49915 Cluster: RAPB protein; n=1; Oryza
           sativa|Rep: RAPB protein - Oryza sativa (Rice), partial
           (31%)
          Length = 847

 Score =  932 bits (470), Expect = 0.0
 Identities = 470/470 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagtcatttctctttatgaatcattctgaaactgagcccagttattcacaagttgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atgaagtcatttctctttatgaatcattctgaaactgagcccagttattcacaagttgat 169

                                                                       
Query: 61  tgtaataactcaatggctcatgctccttatccatatggtgaaccaatttttgctggtcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tgtaataactcaatggctcatgctccttatccatatggtgaaccaatttttgctggtcca 229

                                                                       
Query: 121 tttgttgcttatggaccacaggatgttaatcaaccccaaatgttgttgcctcatatgctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tttgttgcttatggaccacaggatgttaatcaaccccaaatgttgttgcctcatatgctg 289

                                                                       
Query: 181 ggattggcatccactagagttgcattaccacttgatcttgcacaagatggacccatttat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ggattggcatccactagagttgcattaccacttgatcttgcacaagatggacccatttat 349

                                                                       
Query: 241 gtcaatgcgaagcaataccatggtatactgagaaggcgacagtcacgagcaaagcttgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gtcaatgcgaagcaataccatggtatactgagaaggcgacagtcacgagcaaagcttgag 409

                                                                       
Query: 301 gcacagaacaaactcatcaaaagtcgtaagccatatcttcacgagtctcggcaccgccat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gcacagaacaaactcatcaaaagtcgtaagccatatcttcacgagtctcggcaccgccat 469

                                                                       
Query: 361 gctttgaatagggttagggggtctggggggaggttcctcagcacgaaacagctttcgcag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gctttgaatagggttagggggtctggggggaggttcctcagcacgaaacagctttcgcag 529

                                                             
Query: 421 tctaatgcagaatttgtcactggtgggcattctggctctgtcaatttcag 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tctaatgcagaatttgtcactggtgggcattctggctctgtcaatttcag 579