Miyakogusa Predicted Gene

Lj0g3v0252189.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0252189.1 Non Chatacterized Hit- tr|F9GFG8|F9GFG8_FUSOF
Uncharacterized protein OS=Fusarium oxysporum (strain ,40.91,0.33,
,CUFF.16536.1
         (141 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79307 homologue to UniRef100_A7Q145 Cluster: Chromoso...    52   9e-07

>gnl|LJGI|TC79307 homologue to UniRef100_A7Q145 Cluster: Chromosome chr10
           scaffold_43, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr10 scaffold_43, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (23%)
          Length = 563

 Score = 52.0 bits (26), Expect = 9e-07
 Identities = 54/63 (85%), Gaps = 4/63 (6%)
 Strand = Plus / Plus

                                                                       
Query: 51  gggaacttcagaagagggattagctagagggtacacttggtcaagttctggttttattca 110
           ||||||||||||||||| ||    ||||||| ||||||| | |||||||||| |||||||
Sbjct: 12  gggaacttcagaagaggaat----tagagggcacacttgataaagttctggtgttattca 67

              
Query: 111 ggt 113
           |||
Sbjct: 68  ggt 70