Miyakogusa Predicted Gene

Lj0g3v0252179.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0252179.1 tr|G7K7I8|G7K7I8_MEDTR Subtilisin-like protease
OS=Medicago truncatula GN=MTR_5g085690 PE=4 SV=1,50,3e-19,Ribosomal
proteins S24e, L23 and L15e,Ribosomal protein L23/L15e core domain;
SUBTILISIN-LIKE PROTEA,CUFF.16538.1
         (405 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57823 homologue to UniRef100_Q2A9A8 Cluster: 60S ribo...    52   3e-06

>gnl|LJGI|TC57823 homologue to UniRef100_Q2A9A8 Cluster: 60S ribosomal protein L15;
           n=1; Brassica oleracea|Rep: 60S ribosomal protein L15 -
           Brassica oleracea (Wild cabbage), complete
          Length = 905

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 68  ggcctactcgccatggcaaggctcgccacttggattacatggctaagcag 117
           |||||||||||| || ||||||||||| |||||  |||| ||||||||||
Sbjct: 166 ggcctactcgccctgacaaggctcgccgcttgggctacaaggctaagcag 215