Miyakogusa Predicted Gene
- Lj0g3v0251359.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0251359.1 CUFF.16470.1
(2292 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59859 similar to UniRef100_A7QJ79 Cluster: Chromosome... 1221 0.0
gnl|LJGI|TC66688 similar to UniRef100_A7QJ79 Cluster: Chromosome... 1021 0.0
gnl|LJGI|BW625233 similar to UniRef100_A7QJ79 Cluster: Chromosom... 611 e-174
gnl|LJGI|TC79222 weakly similar to UniRef100_A7QJ79 Cluster: Chr... 305 7e-82
gnl|LJGI|BP063080 similar to UniRef100_A7QJ79 Cluster: Chromosom... 196 4e-49
>gnl|LJGI|TC59859 similar to UniRef100_A7QJ79 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 778
Score = 1221 bits (616), Expect = 0.0
Identities = 616/616 (100%)
Strand = Plus / Plus
Query: 1 atggagactcaatctgatggtaatgaggatgctatagctaccattaaagatattaggcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 atggagactcaatctgatggtaatgaggatgctatagctaccattaaagatattaggcaa 222
Query: 61 cagcttgaagctcgcatcgattcccagcacaaggctcacatggaggtgcttggtaatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cagcttgaagctcgcatcgattcccagcacaaggctcacatggaggtgcttggtaatata 282
Query: 121 caagccataatacctaatcttgtctcgtcgcttgacctttctctcaaggttgtctcttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 caagccataatacctaatcttgtctcgtcgcttgacctttctctcaaggttgtctcttcg 342
Query: 181 ttcaaccatcgtccttttgctccgacaccttccctgcctccgcctgatcctaaattgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttcaaccatcgtccttttgctccgacaccttccctgcctccgcctgatcctaaattgaat 402
Query: 241 cctaaaaaagcttctaagttagctcaccgttctaatgctgaaaccagcactgatggctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cctaaaaaagcttctaagttagctcaccgttctaatgctgaaaccagcactgatggctct 462
Query: 301 gttgaggctgacttgttgaatcccaagagtcaaaagaccgataagcctctggattcaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gttgaggctgacttgttgaatcccaagagtcaaaagaccgataagcctctggattcaaac 522
Query: 361 caagcttgccaggtagagtctgagaggcttagtccattagctgtggttcgaacaatggtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 caagcttgccaggtagagtctgagaggcttagtccattagctgtggttcgaacaatggtc 582
Query: 421 gctgtttgtctgttagggcgagtacccttctcaccaattgattcttccactgtgttgagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gctgtttgtctgttagggcgagtacccttctcaccaattgattcttccactgtgttgagg 642
Query: 481 gaattggagaatgatcagacagtgacaccggcagagaaggctgcacttcaggagcttggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gaattggagaatgatcagacagtgacaccggcagagaaggctgcacttcaggagcttggg 702
Query: 541 ggtgattcaggggctatgcatgctgtggagatggctttgaggtcaatggcagatgataat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ggtgattcaggggctatgcatgctgtggagatggctttgaggtcaatggcagatgataat 762
Query: 601 ggtggtattgaattgg 616
||||||||||||||||
Sbjct: 763 ggtggtattgaattgg 778
>gnl|LJGI|TC66688 similar to UniRef100_A7QJ79 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 756
Score = 1021 bits (515), Expect = 0.0
Identities = 515/515 (100%)
Strand = Plus / Plus
Query: 1778 taatcagaactggacgtactggtcactggctcaatcacagtaaggaacattgtcttgttg 1837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taatcagaactggacgtactggtcactggctcaatcacagtaaggaacattgtcttgttg 60
Query: 1838 gaataaagggtagccctatagtgaacaggaatattgacactgatgttattgttgctgagg 1897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaataaagggtagccctatagtgaacaggaatattgacactgatgttattgttgctgagg 120
Query: 1898 ttcgggaaacaagccgcaagccagatgagatgtatcctctgctggagaggataagtccaa 1957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcgggaaacaagccgcaagccagatgagatgtatcctctgctggagaggataagtccaa 180
Query: 1958 gaacaagaaagttggaattgtttgctcgcatgcacaatactcatgcaggatggatgtctc 2017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaacaagaaagttggaattgtttgctcgcatgcacaatactcatgcaggatggatgtctc 240
Query: 2018 ttggtaatcaattgagtggtgtaagattggttgacgaggggctgcgggcaaggtttaagg 2077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttggtaatcaattgagtggtgtaagattggttgacgaggggctgcgggcaaggtttaagg 300
Query: 2078 ctgcttacccagatgtggaggtgcagccatcatcacctcccagagcttctgctatggaag 2137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgcttacccagatgtggaggtgcagccatcatcacctcccagagcttctgctatggaag 360
Query: 2138 tggactctagtgttcctgctcctacgaggagtccatttgcagtcacagaaccaaaatcca 2197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggactctagtgttcctgctcctacgaggagtccatttgcagtcacagaaccaaaatcca 420
Query: 2198 cagcggcgcagtctgcagagcctgcagctccagcaacttccattgcttcagaggagaagt 2257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagcggcgcagtctgcagagcctgcagctccagcaacttccattgcttcagaggagaagt 480
Query: 2258 caatggccattgatgtggtggacattggctaagtg 2292
|||||||||||||||||||||||||||||||||||
Sbjct: 481 caatggccattgatgtggtggacattggctaagtg 515
>gnl|LJGI|BW625233 similar to UniRef100_A7QJ79 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 514
Score = 611 bits (308), Expect = e-174
Identities = 311/312 (99%)
Strand = Plus / Plus
Query: 1 atggagactcaatctgatggtaatgaggatgctatagctaccattaaagatattaggcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 atggagactcaatctgatggtaatgaggatgctatagctaccattaaagatattaggcaa 261
Query: 61 cagcttgaagctcgcatcgattcccagcacaaggctcacatggaggtgcttggtaatata 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cagcttgaagctcgcatcgagtcccagcacaaggctcacatggaggtgcttggtaatata 321
Query: 121 caagccataatacctaatcttgtctcgtcgcttgacctttctctcaaggttgtctcttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 caagccataatacctaatcttgtctcgtcgcttgacctttctctcaaggttgtctcttcg 381
Query: 181 ttcaaccatcgtccttttgctccgacaccttccctgcctccgcctgatcctaaattgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttcaaccatcgtccttttgctccgacaccttccctgcctccgcctgatcctaaattgaat 441
Query: 241 cctaaaaaagcttctaagttagctcaccgttctaatgctgaaaccagcactgatggctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cctaaaaaagcttctaagttagctcaccgttctaatgctgaaaccagcactgatggctct 501
Query: 301 gttgaggctgac 312
||||||||||||
Sbjct: 502 gttgaggctgac 513
>gnl|LJGI|TC79222 weakly similar to UniRef100_A7QJ79 Cluster: Chromosome chr2
scaffold_105, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_105, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 455
Score = 305 bits (154), Expect = 7e-82
Identities = 160/162 (98%)
Strand = Plus / Plus
Query: 2131 atggaagtggactctagtgttcctgctcctacgaggagtccatttgcagtcacagaacca 2190
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggaagtggactctagtgttcctgctcctacgaggagtccatttgcagtcacagaaccc 60
Query: 2191 aaatccacagcggcgcagtctgcagagcctgcagctccagcaacttccattgcttcagag 2250
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatccacagcggcgcagtctccagagcctgcagctccagcaacttccattgcttcagag 120
Query: 2251 gagaagtcaatggccattgatgtggtggacattggctaagtg 2292
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagaagtcaatggccattgatgtggtggacattggctaagtg 162
>gnl|LJGI|BP063080 similar to UniRef100_A7QJ79 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 337
Score = 196 bits (99), Expect = 4e-49
Identities = 116/119 (97%), Gaps = 2/119 (1%)
Strand = Plus / Minus
Query: 2147 gtgttcctgctcctacgaggagtccatttgcagtcacagaaccaaaatccacagcggcgc 2206
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 337 gtgttcctgctcctacgaggagtccatttgcagtcacagaacccaaatccacagcggcgc 278
Query: 2207 agtctgcagagcctgcagctccagcaacttccat-tgcttcagag-gagaagtcaatgg 2263
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 277 agtctgcagagcctgcagctccagcaacttccatntgcttcagagngagaagtcaatgg 219