Miyakogusa Predicted Gene
- Lj0g3v0251049.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0251049.1 Non Chatacterized Hit- tr|O23560|O23560_ARATH
Putative uncharacterized protein AT4g17150
OS=Arabidop,59.29,5e-19,seg,NULL; no description,NULL;
UNCHARACTERIZED,NULL,CUFF.16446.1
(504 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW595576 similar to UniRef100_A7R1A5 Cluster: Chromosom... 583 e-166
gnl|LJGI|TC62368 similar to UniRef100_A7R1A5 Cluster: Chromosome... 133 1e-30
gnl|LJGI|TC70754 homologue to UniRef100_A7R1A5 Cluster: Chromoso... 64 9e-10
>gnl|LJGI|BW595576 similar to UniRef100_A7R1A5 Cluster: Chromosome undetermined
scaffold_342, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_342,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (28%)
Length = 480
Score = 583 bits (294), Expect = e-166
Identities = 320/330 (96%), Gaps = 2/330 (0%)
Strand = Plus / Plus
Query: 175 ggtgataaaaatatcataaagttcgatggtgatcataactcctctcgaccccagttcttt 234
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 9 ggtgataaaaatatcataaagttcgatggtgatcattactcctctcgaccccagttcttt 68
Query: 235 tatgattcagtttccannnnnnnctacaatgtcctccgccctcctcatgtttctagtgct 294
|||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 69 tatgattcagtttccatttttttctacaatgtcctccgccctcctcatgtttctagtgct 128
Query: 295 cataagcttgagaaatattatgattttggggatttgaaacttggttctggtgtggatgag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 cataagcttgagaaatattatgattttggggatttgaaacttggttctggtgtggatgag 188
Query: 355 agcctattatatgagattctctcgagtttgcggtctgtaactactgatgctgcaagttca 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 agcctattatatgagattctctcgagtttgcggtctgtaactactgatgctgcaagttca 248
Query: 415 tcttctgcgcttccaacaacttctaccacaaaatctgttagcgaacttctttcagcagtt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tcttctgcgcttccaacaacttctaccacaaaatctgttagcgaacttctttcagcagtt 308
Query: 475 gcccccttgactgatgtgagtctatgttga 504
|||||||||||||| ||||||||||||||
Sbjct: 309 gcccccttgactga--tgagtctatgttga 336
>gnl|LJGI|TC62368 similar to UniRef100_A7R1A5 Cluster: Chromosome undetermined
scaffold_342, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_342,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (17%)
Length = 760
Score = 133 bits (67), Expect = 1e-30
Identities = 76/78 (97%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 427 ccaacaacttctaccacaaaatctgttagcgaacttctttcagcagttgcccccttgact 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccaacaacttctaccacaaaatctgttagcgaacttctttcagcagttgcccccttgact 61
Query: 487 gatgtgagtctatgttga 504
|| ||||||||||||||
Sbjct: 62 ga--tgagtctatgttga 77
>gnl|LJGI|TC70754 homologue to UniRef100_A7R1A5 Cluster: Chromosome undetermined
scaffold_342, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_342,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (38%)
Length = 832
Score = 63.9 bits (32), Expect = 9e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 atggctgtgcaatacatgcgacgggttattgc 32
||||||||||||||||||||||||||||||||
Sbjct: 801 atggctgtgcaatacatgcgacgggttattgc 832