Miyakogusa Predicted Gene

Lj0g3v0251019.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0251019.1 CUFF.16443.1
         (471 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69358 similar to UniRef100_A7PH11 Cluster: Chromosome...   206   9e-53
gnl|LJGI|GO013204 similar to UniRef100_A7PH11 Cluster: Chromosom...   192   1e-48

>gnl|LJGI|TC69358 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (30%)
          Length = 795

 Score =  206 bits (104), Expect = 9e-53
 Identities = 170/192 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaaagggccatattcattcttatgattgtaagcattccacttgcaattatttgggca 60
           ||||| ||||| || || ||||||||| |||| |||||||| ||||| ||||||||||||
Sbjct: 602 atgcagagggctatgttgattcttatggttgtcagcattccgcttgcgattatttgggca 661

                                                                       
Query: 61  aacacaagatccattcttgtgttccttcgccaggatcctgagatatctgcagcagctggc 120
           |||||| ||||||| ||  | |||||| |||| |||||||||||||||||||||||||| 
Sbjct: 662 aacacaggatccatcctcattttccttggccaagatcctgagatatctgcagcagctggg 721

                                                                       
Query: 121 gactatgctaagttaatggttccaagcctttttggttatggtcttctgcagtgcctaaac 180
           || ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| || 
Sbjct: 722 gaatatgctaagataatggttccatgcctttttggttatggtcttctgcaatgcctcaat 781

                       
Query: 181 agattcttacaa 192
           ||||||||||||
Sbjct: 782 agattcttacaa 793


>gnl|LJGI|GO013204 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (35%)
          Length = 528

 Score =  192 bits (97), Expect = 1e-48
 Identities = 199/233 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaaagggccatattcattcttatgattgtaagcattccacttgcaattatttgggca 60
           ||||||||||||||  ||| |||| ||||||| ||||| ||  | ||||| |||||||||
Sbjct: 240 atgcaaagggccatgctcactcttgtgattgtcagcatacccttagcaatcatttgggca 299

                                                                       
Query: 61  aacacaagatccattcttgtgttccttcgccaggatcctgagatatctgcagcagctggc 120
           |||||||| |||||||| || ||| || |||| |||||||| |||||||||| ||| || 
Sbjct: 300 aacacaaggtccattctggttttctttggccaagatcctgaaatatctgcagaagcaggg 359

                                                                       
Query: 121 gactatgctaagttaatggttccaagcctttttggttatggtcttctgcagtgcctaaac 180
            | |||||| ||||||||||||||||||||||||  ||||||||||| || || ||||||
Sbjct: 360 aaatatgctcagttaatggttccaagcctttttgcctatggtcttcttcaatgtctaaac 419

                                                                
Query: 181 agattcttacaaacccaaaatattgtatttccaatgatgctcagctcaggagt 233
           |||||||||||||| |||||||||||||| ||||  ||| ||||||| |||||
Sbjct: 420 agattcttacaaacacaaaatattgtattgccaactatgttcagctctggagt 472