Miyakogusa Predicted Gene

Lj0g3v0250619.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0250619.1 CUFF.16409.1
         (579 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74335 weakly similar to UniRef100_Q9ZNY1 Cluster: Pro...   589   e-168

>gnl|LJGI|TC74335 weakly similar to UniRef100_Q9ZNY1 Cluster: Proline-rich protein
           precursor; n=1; Zea mays|Rep: Proline-rich protein
           precursor - Zea mays (Maize), partial (8%)
          Length = 628

 Score =  589 bits (297), Expect = e-168
 Identities = 297/297 (100%)
 Strand = Plus / Plus

                                                                       
Query: 223 ctcctccacaacctcgccctccccccacattcaaccgagctcctccgccgcagcagcagc 282
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ctcctccacaacctcgccctccccccacattcaaccgagctcctccgccgcagcagcagc 391

                                                                       
Query: 283 agccgtcgcatttctcgcacttctcatcgcttccgccttcctccgctccttctccgtcgc 342
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 agccgtcgcatttctcgcacttctcatcgcttccgccttcctccgctccttctccgtcgc 451

                                                                       
Query: 343 cggcgtcttcttttaattccactccctcgccgtcgattcccgcccccgcagccgcgccga 402
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cggcgtcttcttttaattccactccctcgccgtcgattcccgcccccgcagccgcgccga 511

                                                                       
Query: 403 gaggtggcatggcgatcggtgtacccgcgcaccaccagaacccctcccctccgttctcct 462
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gaggtggcatggcgatcggtgtacccgcgcaccaccagaacccctcccctccgttctcct 571

                                                                    
Query: 463 ctaccttcggtcaacattttggcgggttgggtcgacctggagtcaatgttaccgaat 519
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ctaccttcggtcaacattttggcgggttgggtcgacctggagtcaatgttaccgaat 628



 Score = 99.6 bits (50), Expect = 2e-20
 Identities = 50/50 (100%)
 Strand = Plus / Plus

                                                             
Query: 1   atggaccctcaacctccggccaccgccgccgccaccgctcggagcacctc 50
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  atggaccctcaacctccggccaccgccgccgccaccgctcggagcacctc 125