Miyakogusa Predicted Gene

Lj0g3v0250469.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0250469.2 tr|B9GQI3|B9GQI3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_756265 PE=4
SV=1,37.84,3e-17,seg,NULL; SNARE_assoc,SNARE associated Golgi
protein,CUFF.16395.2
         (1134 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS330447 homologue to UniRef100_Q4RNE6 Cluster: Chromos...   922   0.0  

>gnl|LJGI|FS330447 homologue to UniRef100_Q4RNE6 Cluster: Chromosome undetermined
           SCAF15013  whole genome shotgun sequence; n=1;
           Tetraodon, partial (3%)
          Length = 679

 Score =  922 bits (465), Expect = 0.0
 Identities = 465/465 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctgtagcgcctgttttaccacgcggatatttcttaaaccttcgcacacccagtcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atgtctgtagcgcctgttttaccacgcggatatttcttaaaccttcgcacacccagtcta 274

                                                                       
Query: 61  cgatgtggtagtcctacacccattacacacttttgctgcttcaatgtccgtcgcaggttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cgatgtggtagtcctacacccattacacacttttgctgcttcaatgtccgtcgcaggttg 334

                                                                       
Query: 121 tctgcaaacgagaatgtagtagttgcccatgtttctcaactctttggaagcagaattaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tctgcaaacgagaatgtagtagttgcccatgtttctcaactctttggaagcagaattaga 394

                                                                       
Query: 181 tgctttaagcaagaaggtgcggaaaattttgaggctgtaaaacctaagaatataccagaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tgctttaagcaagaaggtgcggaaaattttgaggctgtaaaacctaagaatataccagaa 454

                                                                       
Query: 241 ccagattcgcaagatagcttcgttaatgaggtgcaaataaaaggtaaaggggggcataac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ccagattcgcaagatagcttcgttaatgaggtgcaaataaaaggtaaaggggggcataac 514

                                                                       
Query: 301 aagacagaaatctccttcctggcaatgatagcaattgcattgggcatagctgtaatagca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aagacagaaatctccttcctggcaatgatagcaattgcattgggcatagctgtaatagca 574

                                                                       
Query: 361 acattagcttccattggcaacaaacctattcttggatcaacgtttcgtccacagattcta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 acattagcttccattggcaacaaacctattcttggatcaacgtttcgtccacagattcta 634

                                                        
Query: 421 gcagaaggttcttcctcttcagcagtcgcccccgcccctggtggt 465
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gcagaaggttcttcctcttcagcagtcgcccccgcccctggtggt 679