Miyakogusa Predicted Gene
- Lj0g3v0250259.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0250259.2 Non Chatacterized Hit- tr|I1JM14|I1JM14_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.45,0,AUX_IAA,AUX/IAA protein; Auxin_resp,Auxin response
factor; B3,B3 DNA binding domain; no description,,CUFF.16426.2
(2055 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80968 similar to UniRef100_A7QU71 Cluster: Chromosome... 1247 0.0
gnl|LJGI|DC593681 similar to UniRef100_A7QU71 Cluster: Chromosom... 436 e-121
gnl|LJGI|TC65587 homologue to UniRef100_A7QU71 Cluster: Chromoso... 416 e-115
gnl|LJGI|FS323681 similar to UniRef100_Q8MQY8 Cluster: RE50383p;... 58 2e-07
>gnl|LJGI|TC80968 similar to UniRef100_A7QU71 Cluster: Chromosome chr2 scaffold_176,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_176, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 1110
Score = 1247 bits (629), Expect = 0.0
Identities = 635/637 (99%)
Strand = Plus / Plus
Query: 1419 cagaatgaacatcgattacgtgcttgatcaagttgacaaggagagcaaagttgagactgc 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cagaatgaacatcgattacgtgcttgatcaagttgacaaggagagcaaagttgagactgc 366
Query: 1479 tacgagttatcgcttgtttggaattgaccttatcgatcattccaggaactcagctgctgc 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tacgagttatcgcttgtttggaattgaccttatcgatcattccaggaactcagctgctgc 426
Query: 1539 agaaaatgcatctccacatgtagtaaatgtacccagagctgaagtctgtgccactgccag 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agaaaatgcatctccacatgtagtaaatgtacccagagctgaagtctgtgccactgccag 486
Query: 1599 caccttgtccaaaactgatagtggctctaagtcagatatctcgaaggcttccgagagaaa 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 caccttgtccaaaactgatagtggctctaagtcagatatctcgaaggcttccgagagaaa 546
Query: 1659 acaagaacagcagcaaggaccccagaaggagactcagagcaagcaaatttgtggccgaag 1718
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 acaagaacagcagcaagtaccccagaaggagactcagagcaagcaaatttgtggccgaag 606
Query: 1719 tcgcaccaaggttcaaatgcagggggttgcagtgggtcgtgcggtggacttgaacacgtt 1778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tcgcaccaaggttcaaatgcagggggttgcagtgggtcgtgcggtggacttgaacacgtt 666
Query: 1779 ggatggttatgatcaacttatagatgaactggagcagctgtttgacttaaagggacaact 1838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ggatggttatgatcaacttatagatgaactggagcagctgtttgacttaaagggacaact 726
Query: 1839 tcaacacagaaataagtgggaaattgtcttcactgatgatgaaggggatatgatgcttgt 1898
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 727 tcaacacagaaataagtgggaaattgtctccactgatgatgaaggggatatgatgcttgt 786
Query: 1899 gggagatgatccatggcctgaattttgtaatatggtgaaaagaatcttcatttgctccag 1958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 gggagatgatccatggcctgaattttgtaatatggtgaaaagaatcttcatttgctccag 846
Query: 1959 ccaggatgtgaagaagatgagttcaggaagcaaactaccaatctcttccatggaagaagg 2018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ccaggatgtgaagaagatgagttcaggaagcaaactaccaatctcttccatggaagaagg 906
Query: 2019 gactgtaataagctcagagacaaccgaaacctgaaac 2055
|||||||||||||||||||||||||||||||||||||
Sbjct: 907 gactgtaataagctcagagacaaccgaaacctgaaac 943
Score = 527 bits (266), Expect = e-149
Identities = 272/274 (99%)
Strand = Plus / Plus
Query: 1144 agcgaaattccagatgttgacacaacatcagctgcctctgctttttgggatgctggaatg 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agcgaaattccagatgttgacacaacatcagctgcctctgctttttgggatgctggaatg 61
Query: 1204 aaacatgctgacatgacacaacttggtgttttatctgaaagcaaaagaagcgatgtgagt 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aaacatgctgacatgacacaacttggtgttttatctgaaagcaaaagaagcgatgtgagt 121
Query: 1264 ggtatgtggcatcataagcaaactgatatgaatagtaaaaccaacagcaacactatgtca 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggtatgtggcatcataagcaaactgatatgaatagtaaaaccaacagcaacactatgtca 181
Query: 1324 aggaaccagacagaagcaagttggctatcttctccccattcgagttatccttctcattta 1383
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 182 aggaaccagacagaagcaagttggctatctcctccccatccgagttatccttctcattta 241
Query: 1384 gttcaggacacaacagatgatagcaagagcgtct 1417
||||||||||||||||||||||||||||||||||
Sbjct: 242 gttcaggacacaacagatgatagcaagagcgtct 275
>gnl|LJGI|DC593681 similar to UniRef100_A7QU71 Cluster: Chromosome chr2 scaffold_176,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_176, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 498
Score = 436 bits (220), Expect = e-121
Identities = 227/228 (99%), Gaps = 1/228 (0%)
Strand = Plus / Plus
Query: 1 atgatgatgatgaaccgtgggtcaaatgtttcagctgaagtgggtggttccggtgggagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atgatgatgatgaaccgtgggtcaaatgtttcagctgaagtgggtggttccggtgggagt 331
Query: 61 ggcgatgagctgtatgagccgctttggaagctgagcgcgggaccactggttgatgttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ggcgatgagctgtatgagccgctttggaagctgagcgcgggaccactggttgatgttcct 391
Query: 121 cgtgttggacagagggtcttctatttccctcaggggcacatggaacaattagaggcttca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cgtgttggacagagggtcttctatttccctcaggggcacatggaacaattagaggcttc- 450
Query: 181 accaatcaggagctgaatcagaggattcctctcttgaagcttccaaca 228
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 accaatcaggagctgaatcagaggattcctctcttgaagcttccaaca 498
>gnl|LJGI|TC65587 homologue to UniRef100_A7QU71 Cluster: Chromosome chr2 scaffold_176,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_176, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 824
Score = 416 bits (210), Expect = e-115
Identities = 210/210 (100%)
Strand = Plus / Plus
Query: 1846 agaaataagtgggaaattgtcttcactgatgatgaaggggatatgatgcttgtgggagat 1905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agaaataagtgggaaattgtcttcactgatgatgaaggggatatgatgcttgtgggagat 61
Query: 1906 gatccatggcctgaattttgtaatatggtgaaaagaatcttcatttgctccagccaggat 1965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gatccatggcctgaattttgtaatatggtgaaaagaatcttcatttgctccagccaggat 121
Query: 1966 gtgaagaagatgagttcaggaagcaaactaccaatctcttccatggaagaagggactgta 2025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtgaagaagatgagttcaggaagcaaactaccaatctcttccatggaagaagggactgta 181
Query: 2026 ataagctcagagacaaccgaaacctgaaac 2055
||||||||||||||||||||||||||||||
Sbjct: 182 ataagctcagagacaaccgaaacctgaaac 211
>gnl|LJGI|FS323681 similar to UniRef100_Q8MQY8 Cluster: RE50383p; n=1; Drosophila
melanogaster|Rep: RE50383p - Drosophila melanogaster
(Fruit fly), partial (4%)
Length = 375
Score = 58.0 bits (29), Expect = 2e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 atgatgatgatgaaccgtgggtcaaatgt 29
|||||||||||||||||||||||||||||
Sbjct: 347 atgatgatgatgaaccgtgggtcaaatgt 375