Miyakogusa Predicted Gene

Lj0g3v0250209.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0250209.1 tr|J5KAG8|J5KAG8_9GAMM Ribonucleoside-diphosphate
reductase, beta subunit OS=SAR86 cluster
bacterium,30.91,1.3,seg,NULL,CUFF.16372.1
         (331 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66279 similar to UniRef100_A9VE86 Cluster: Predicted ...   640   0.0  

>gnl|LJGI|TC66279 similar to UniRef100_A9VE86 Cluster: Predicted protein; n=1;
           Monosiga brevicollis MX1|Rep: Predicted protein -
           Monosiga brevicollis MX1, partial (18%)
          Length = 598

 Score =  640 bits (323), Expect = 0.0
 Identities = 329/331 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggtgacttgttggaagttgagccacgatgatgaggagtccgaactagagccagaggaa 60
           ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 atggtgacttcctggaagttgagccacgatgatgaggagtccgaactagagccagaggaa 282

                                                                       
Query: 61  gagcttcccaaggtgacagacgatccttggaatgagattaacccatctgacgatgagttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gagcttcccaaggtgacagacgatccttggaatgagattaacccatctgacgatgagttg 222

                                                                       
Query: 121 tggtcccgaagcttcactgcaaggaccaagcggcagttccagaatggtcaaaggggcatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tggtcccgaagcttcactgcaaggaccaagcggcagttccagaatggtcaaaggggcatc 162

                                                                       
Query: 181 tatgtggacttgaagacttcatggaggacatgctctggaatgactagggttgggttgagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 tatgtggacttgaagacttcatggaggacatgctctggaatgactagggttgggttgagt 102

                                                                       
Query: 241 gacttgtacttcttcttctgggttgagagtatcaggtgggcgttgaactatttagtttac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gacttgtacttcttcttctgggttgagagtatcaggtgggcgttgaactatttagtttac 42

                                          
Query: 301 ctttcagttggatattttccttccacttaat 331
           |||||||||||||||||||||||||||||||
Sbjct: 41  ctttcagttggatattttccttccacttaat 11