Miyakogusa Predicted Gene
- Lj0g3v0249949.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0249949.1 Non Chatacterized Hit- tr|I1LK89|I1LK89_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.67,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; CCR4 NOT-RELATED,NULL;
NOT2_3_5,NOT2/NOT3/NOT5,CUFF.16416.1
(1983 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70707 similar to UniRef100_A7NZ87 Cluster: Chromosome... 551 e-156
gnl|LJGI|BP076652 similar to UniRef100_Q52JK6 Cluster: VIP2; n=1... 434 e-121
gnl|LJGI|GO008348 similar to UniRef100_A7NZ87 Cluster: Chromosom... 416 e-115
gnl|LJGI|TC74498 similar to UniRef100_A7NZ87 Cluster: Chromosome... 254 2e-66
gnl|LJGI|DC592944 similar to UniRef100_A7NZ87 Cluster: Chromosom... 188 9e-47
>gnl|LJGI|TC70707 similar to UniRef100_A7NZ87 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 559
Score = 551 bits (278), Expect = e-156
Identities = 312/326 (95%), Gaps = 13/326 (3%)
Strand = Plus / Plus
Query: 1 atgtcgggcttacttaattcttctctgaacggatctgcgtcaaatcttccagatggtacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 atgtcgggcttacttaattcttctctgaacggatctgcgtcaaatcttccagatggtacg 293
Query: 61 gggcggtcttttgcgacgtctttctctggtcagtcgggtgtagcctccccagtttttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gggcggtcttttgcgacgtctttctctggtcagtcgggtgtagcctccccagtttttcat 353
Query: 121 cactctg-------------gaactattcaggggttgcacaatattcacgggagctttaa 167
||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 cactctgcttcttcctgcaggaactattcaggggttgcacaatattcacgggagctttaa 413
Query: 168 tgttcccaacatgccgaatacacttacatcaagaaacttaacaataaatcctactggagg 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tgttcccaacatgccgaatacacttacatcaagaaacttaacaataaatcctactggagg 473
Query: 228 ggttcaacaacctacagcgaatctttctagtggaagatttgcgtcaaataatctaccagt 287
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 474 ggttcaacaacctacagcgaatctttctagcggaagatttgcgtcaaataatctaccagt 533
Query: 288 tgctttgtcacagctttctcatggaa 313
||||||||||||||||||||||||||
Sbjct: 534 tgctttgtcacagctttctcatggaa 559
>gnl|LJGI|BP076652 similar to UniRef100_Q52JK6 Cluster: VIP2; n=1; Nicotiana
benthamiana|Rep: VIP2 - Nicotiana benthamiana, partial
(13%)
Length = 342
Score = 434 bits (219), Expect = e-121
Identities = 241/247 (97%), Gaps = 1/247 (0%)
Strand = Plus / Minus
Query: 1738 tacagcatgcctagagatgaagcacaactatatgcagcacatgaactttacaaa-cgggg 1796
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 342 tacagcatgcctagagatgaagcacaactatatgcagcacatgaactttacaaaacgggg 283
Query: 1797 ctggttttatcacaaagaacatcgtttgtggtttataagagttcccaacatggagccact 1856
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ctggttttatcaccaagaacatcgtttgtggtttataagagttcccaacatggagccact 223
Query: 1857 tgtcaaaacaaacgcctacgagagaggatcttaccattgttttgatccaagcagttttaa 1916
|||| |||| ||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 222 tgtccaaaccaacgcctacgagagaggatcttacccttgttttgatcccagcagttttaa 163
Query: 1917 aacggtccagaaggataattttgttctctattatgaaatggtggaaaagagacccctggc 1976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 aacggtccagaaggataattttgttctctattatgaaatggtggaaaagagacccctggc 103
Query: 1977 ttaacat 1983
|||||||
Sbjct: 102 ttaacat 96
>gnl|LJGI|GO008348 similar to UniRef100_A7NZ87 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 704
Score = 416 bits (210), Expect = e-115
Identities = 417/485 (85%), Gaps = 7/485 (1%)
Strand = Plus / Plus
Query: 1 atgtcgggcttacttaattcttctctgaacggatctgcgtcaaatcttccagatggtacg 60
|||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 221 atgtcggggttactaaattcttctctgaatggatctgcttcaaatcttccagatggcgct 280
Query: 61 gggcggtcttttgcgacgtctttctctggtcagtcgggtgtagcctccccagtttttcat 120
|||||||||||||| || || |||||||||||||| |||| |||||||||| ||||||||
Sbjct: 281 gggcggtcttttgctacatcattctctggtcagtctggtgcagcctccccaatttttcat 340
Query: 121 cactctggaactattcaggggttgcacaatattcacgggagctttaatgttcccaacatg 180
||| ||||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||
Sbjct: 341 cacactggatctattcaggggttgcacaacattcataggagctttaatgttcccaatatg 400
Query: 181 ccgaatacacttacatcaagaaacttaacaataaa------tcctactggaggggttcaa 234
| |||||| ||||||||||||| ||||||||| ||| |||| || ||||||
Sbjct: 401 tctggtacactcacatcaagaaactcaacaataaataatgttccgtctgggggtgttcaa 460
Query: 235 caacctacagcgaatctttctagtggaagatttgcgtcaaataatctaccagttgctttg 294
||||| |||| || |||||||||||||||||| | ||||| ||||| || ||||| |
Sbjct: 461 caaccaacagggagcctttctagtggaagatttacatcaaacaatctccctgttgcactt 520
Query: 295 tcacagctttctcatggaagttcccatggacattcaggagtcaacagtagaggaggtata 354
|||||| | ||||||||||| |||||||||||||| ||||||| || |||||||||||||
Sbjct: 521 tcacagttatctcatggaagctcccatggacattctggagtcaccaatagaggaggtata 580
Query: 355 agtgttgtcggaaaccctggatttaatactagctcaaatggagttactggttctattcct 414
|||||||| |||||||||||||||| || |||| |||||||| || |||||||||||||
Sbjct: 581 agtgttgtaggaaaccctggatttagtagtagcacaaatggaattggtggttctattcct 640
Query: 415 gggattcttccaacttctgctgcaattggtaacagaaatgctgttccagggttgggagta 474
||||||||||| || || ||||| ||||||||| |||||||| ||||||| ||||| |||
Sbjct: 641 gggattcttcc-acatcagctgcgattggtaaccgaaatgctattccaggattgggggta 699
Query: 475 tcccc 479
|||||
Sbjct: 700 tcccc 704
>gnl|LJGI|TC74498 similar to UniRef100_A7NZ87 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (24%)
Length = 729
Score = 254 bits (128), Expect = 2e-66
Identities = 302/360 (83%)
Strand = Plus / Plus
Query: 1542 tgatcttacaacactagggttgaatttgaattcatcagaaaatcttcacaagacttttgc 1601
||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgatcttactacacttgggttaaatttgaattcatcagagaatcttcacaagacttttgc 60
Query: 1602 gtctccgtggtctgacgaaccagctaagagtgatccagagttcactgtgctacaatgtta 1661
||||| |||||||| || ||| ||||| ||| |||||||| | ||||| |||||||||
Sbjct: 61 atctccatggtctgaagacccaactaaggctgacccagagtttagtgtgccacaatgtta 120
Query: 1662 taatgctaaacaacctcccgccctgcaccaaggatatttttcaaagttctctgtggaaac 1721
| | |||||||||| || | || || ||||| |||||||||||||| || ||||||||
Sbjct: 121 ttacactaaacaaccacctactcttcatcaaggttatttttcaaagttttcggtggaaac 180
Query: 1722 attattttatatattttacagcatgcctagagatgaagcacaactatatgcagcacatga 1781
||| ||||| || |||||||||||||| | |||||||||||| ||||||| ||| ||||
Sbjct: 181 attgttttacatcttttacagcatgcccaaagatgaagcacagttatatgctgcaaatga 240
Query: 1782 actttacaaacggggctggttttatcacaaagaacatcgtttgtggtttataagagttcc 1841
||| |||| | || |||||||||||| |||| | |||| | ||||| |||||||||||
Sbjct: 241 gcttaacaacagaggatggttttatcaccaagagcttcgtctttggttgataagagttcc 300
Query: 1842 caacatggagccacttgtcaaaacaaacgcctacgagagaggatcttaccattgttttga 1901
|||||| |||||||| || ||||||||| | | ||||||||||| || || ||||||||
Sbjct: 301 caacatagagccactggttaaaacaaacacacatgagagaggatcatatcactgttttga 360
>gnl|LJGI|DC592944 similar to UniRef100_A7NZ87 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 589
Score = 188 bits (95), Expect = 9e-47
Identities = 208/246 (84%), Gaps = 6/246 (2%)
Strand = Plus / Plus
Query: 123 ctctggaactattcaggggttgcacaatattcacgggagctttaatgttcccaacatgcc 182
||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| ||| |
Sbjct: 343 ctctggatctattcaggggttgcacaacattcatgggagctttaatgttcccaatatgtc 402
Query: 183 gaatacacttacatcaagaaacttaacaataaat------cctactggaggggttcaaca 236
|||||| ||||||||||||| |||||||||| || |||| || ||||||||
Sbjct: 403 tggtacactcacatcaagaaactcaacaataaataatgttccgtctgggggtgttcaaca 462
Query: 237 acctacagcgaatctttctagtggaagatttgcgtcaaataatctaccagttgctttgtc 296
||| |||| || |||||||||||||||||| | ||||| ||||| || ||||| | ||
Sbjct: 463 accaacagggagcctttctagtggaagatttacatcaaacaatctccctgttgcactttc 522
Query: 297 acagctttctcatggaagttcccatggacattcaggagtcaacagtagaggaggtataag 356
|||| | ||||||||||| |||||||||||||| ||||||| || |||||||||||||||
Sbjct: 523 acagttatctcatggaagctcccatggacattctggagtcaccaatagaggaggtataag 582
Query: 357 tgttgt 362
||||||
Sbjct: 583 tgttgt 588
Score = 97.6 bits (49), Expect = 3e-19
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 1 atgtcgggcttacttaattcttctctgaacggatctgcgtcaaatcttccagatggtacg 60
|||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 260 atgtcggggttactaaattcttctctgaatggatctgcttcaaatcttccagatggcgct 319
Query: 61 gggcggtcttttgcgacgtctttctctgg 89
|||||||||||||| || || ||||||||
Sbjct: 320 gggcggtcttttgctacatcattctctgg 348