Miyakogusa Predicted Gene

Lj0g3v0249949.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0249949.1 Non Chatacterized Hit- tr|I1LK89|I1LK89_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.67,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; CCR4 NOT-RELATED,NULL;
NOT2_3_5,NOT2/NOT3/NOT5,CUFF.16416.1
         (1983 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70707 similar to UniRef100_A7NZ87 Cluster: Chromosome...   551   e-156
gnl|LJGI|BP076652 similar to UniRef100_Q52JK6 Cluster: VIP2; n=1...   434   e-121
gnl|LJGI|GO008348 similar to UniRef100_A7NZ87 Cluster: Chromosom...   416   e-115
gnl|LJGI|TC74498 similar to UniRef100_A7NZ87 Cluster: Chromosome...   254   2e-66
gnl|LJGI|DC592944 similar to UniRef100_A7NZ87 Cluster: Chromosom...   188   9e-47

>gnl|LJGI|TC70707 similar to UniRef100_A7NZ87 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 559

 Score =  551 bits (278), Expect = e-156
 Identities = 312/326 (95%), Gaps = 13/326 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcgggcttacttaattcttctctgaacggatctgcgtcaaatcttccagatggtacg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 atgtcgggcttacttaattcttctctgaacggatctgcgtcaaatcttccagatggtacg 293

                                                                       
Query: 61  gggcggtcttttgcgacgtctttctctggtcagtcgggtgtagcctccccagtttttcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gggcggtcttttgcgacgtctttctctggtcagtcgggtgtagcctccccagtttttcat 353

                                                                       
Query: 121 cactctg-------------gaactattcaggggttgcacaatattcacgggagctttaa 167
           |||||||             ||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 cactctgcttcttcctgcaggaactattcaggggttgcacaatattcacgggagctttaa 413

                                                                       
Query: 168 tgttcccaacatgccgaatacacttacatcaagaaacttaacaataaatcctactggagg 227
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tgttcccaacatgccgaatacacttacatcaagaaacttaacaataaatcctactggagg 473

                                                                       
Query: 228 ggttcaacaacctacagcgaatctttctagtggaagatttgcgtcaaataatctaccagt 287
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 474 ggttcaacaacctacagcgaatctttctagcggaagatttgcgtcaaataatctaccagt 533

                                     
Query: 288 tgctttgtcacagctttctcatggaa 313
           ||||||||||||||||||||||||||
Sbjct: 534 tgctttgtcacagctttctcatggaa 559


>gnl|LJGI|BP076652 similar to UniRef100_Q52JK6 Cluster: VIP2; n=1; Nicotiana
            benthamiana|Rep: VIP2 - Nicotiana benthamiana, partial
            (13%)
          Length = 342

 Score =  434 bits (219), Expect = e-121
 Identities = 241/247 (97%), Gaps = 1/247 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1738 tacagcatgcctagagatgaagcacaactatatgcagcacatgaactttacaaa-cgggg 1796
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 342  tacagcatgcctagagatgaagcacaactatatgcagcacatgaactttacaaaacgggg 283

                                                                        
Query: 1797 ctggttttatcacaaagaacatcgtttgtggtttataagagttcccaacatggagccact 1856
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282  ctggttttatcaccaagaacatcgtttgtggtttataagagttcccaacatggagccact 223

                                                                        
Query: 1857 tgtcaaaacaaacgcctacgagagaggatcttaccattgttttgatccaagcagttttaa 1916
            |||| |||| ||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 222  tgtccaaaccaacgcctacgagagaggatcttacccttgttttgatcccagcagttttaa 163

                                                                        
Query: 1917 aacggtccagaaggataattttgttctctattatgaaatggtggaaaagagacccctggc 1976
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162  aacggtccagaaggataattttgttctctattatgaaatggtggaaaagagacccctggc 103

                   
Query: 1977 ttaacat 1983
            |||||||
Sbjct: 102  ttaacat 96


>gnl|LJGI|GO008348 similar to UniRef100_A7NZ87 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 704

 Score =  416 bits (210), Expect = e-115
 Identities = 417/485 (85%), Gaps = 7/485 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcgggcttacttaattcttctctgaacggatctgcgtcaaatcttccagatggtacg 60
           |||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||  | 
Sbjct: 221 atgtcggggttactaaattcttctctgaatggatctgcttcaaatcttccagatggcgct 280

                                                                       
Query: 61  gggcggtcttttgcgacgtctttctctggtcagtcgggtgtagcctccccagtttttcat 120
           |||||||||||||| || || |||||||||||||| |||| |||||||||| ||||||||
Sbjct: 281 gggcggtcttttgctacatcattctctggtcagtctggtgcagcctccccaatttttcat 340

                                                                       
Query: 121 cactctggaactattcaggggttgcacaatattcacgggagctttaatgttcccaacatg 180
           ||| ||||| ||||||||||||||||||| |||||  ||||||||||||||||||| |||
Sbjct: 341 cacactggatctattcaggggttgcacaacattcataggagctttaatgttcccaatatg 400

                                                                       
Query: 181 ccgaatacacttacatcaagaaacttaacaataaa------tcctactggaggggttcaa 234
            |   |||||| ||||||||||||| |||||||||      |||  |||| || ||||||
Sbjct: 401 tctggtacactcacatcaagaaactcaacaataaataatgttccgtctgggggtgttcaa 460

                                                                       
Query: 235 caacctacagcgaatctttctagtggaagatttgcgtcaaataatctaccagttgctttg 294
           ||||| |||| ||  |||||||||||||||||| | ||||| ||||| || |||||  | 
Sbjct: 461 caaccaacagggagcctttctagtggaagatttacatcaaacaatctccctgttgcactt 520

                                                                       
Query: 295 tcacagctttctcatggaagttcccatggacattcaggagtcaacagtagaggaggtata 354
           |||||| | ||||||||||| |||||||||||||| ||||||| || |||||||||||||
Sbjct: 521 tcacagttatctcatggaagctcccatggacattctggagtcaccaatagaggaggtata 580

                                                                       
Query: 355 agtgttgtcggaaaccctggatttaatactagctcaaatggagttactggttctattcct 414
           |||||||| |||||||||||||||| || |||| |||||||| ||  |||||||||||||
Sbjct: 581 agtgttgtaggaaaccctggatttagtagtagcacaaatggaattggtggttctattcct 640

                                                                       
Query: 415 gggattcttccaacttctgctgcaattggtaacagaaatgctgttccagggttgggagta 474
           ||||||||||| || || ||||| ||||||||| |||||||| ||||||| ||||| |||
Sbjct: 641 gggattcttcc-acatcagctgcgattggtaaccgaaatgctattccaggattgggggta 699

                
Query: 475 tcccc 479
           |||||
Sbjct: 700 tcccc 704


>gnl|LJGI|TC74498 similar to UniRef100_A7NZ87 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (24%)
          Length = 729

 Score =  254 bits (128), Expect = 2e-66
 Identities = 302/360 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1542 tgatcttacaacactagggttgaatttgaattcatcagaaaatcttcacaagacttttgc 1601
            ||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 1    tgatcttactacacttgggttaaatttgaattcatcagagaatcttcacaagacttttgc 60

                                                                        
Query: 1602 gtctccgtggtctgacgaaccagctaagagtgatccagagttcactgtgctacaatgtta 1661
             ||||| |||||||| || ||| |||||  ||| |||||||| | ||||| |||||||||
Sbjct: 61   atctccatggtctgaagacccaactaaggctgacccagagtttagtgtgccacaatgtta 120

                                                                        
Query: 1662 taatgctaaacaacctcccgccctgcaccaaggatatttttcaaagttctctgtggaaac 1721
            | |  |||||||||| ||  | || || ||||| |||||||||||||| || ||||||||
Sbjct: 121  ttacactaaacaaccacctactcttcatcaaggttatttttcaaagttttcggtggaaac 180

                                                                        
Query: 1722 attattttatatattttacagcatgcctagagatgaagcacaactatatgcagcacatga 1781
            ||| ||||| || |||||||||||||| | ||||||||||||  ||||||| ||| ||||
Sbjct: 181  attgttttacatcttttacagcatgcccaaagatgaagcacagttatatgctgcaaatga 240

                                                                        
Query: 1782 actttacaaacggggctggttttatcacaaagaacatcgtttgtggtttataagagttcc 1841
             ||| ||||  | || |||||||||||| |||| | |||| | ||||| |||||||||||
Sbjct: 241  gcttaacaacagaggatggttttatcaccaagagcttcgtctttggttgataagagttcc 300

                                                                        
Query: 1842 caacatggagccacttgtcaaaacaaacgcctacgagagaggatcttaccattgttttga 1901
            |||||| |||||||| || ||||||||| |  | ||||||||||| || || ||||||||
Sbjct: 301  caacatagagccactggttaaaacaaacacacatgagagaggatcatatcactgttttga 360


>gnl|LJGI|DC592944 similar to UniRef100_A7NZ87 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 589

 Score =  188 bits (95), Expect = 9e-47
 Identities = 208/246 (84%), Gaps = 6/246 (2%)
 Strand = Plus / Plus

                                                                       
Query: 123 ctctggaactattcaggggttgcacaatattcacgggagctttaatgttcccaacatgcc 182
           ||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| ||| |
Sbjct: 343 ctctggatctattcaggggttgcacaacattcatgggagctttaatgttcccaatatgtc 402

                                                                       
Query: 183 gaatacacttacatcaagaaacttaacaataaat------cctactggaggggttcaaca 236
              |||||| ||||||||||||| ||||||||||      ||  |||| || ||||||||
Sbjct: 403 tggtacactcacatcaagaaactcaacaataaataatgttccgtctgggggtgttcaaca 462

                                                                       
Query: 237 acctacagcgaatctttctagtggaagatttgcgtcaaataatctaccagttgctttgtc 296
           ||| |||| ||  |||||||||||||||||| | ||||| ||||| || |||||  | ||
Sbjct: 463 accaacagggagcctttctagtggaagatttacatcaaacaatctccctgttgcactttc 522

                                                                       
Query: 297 acagctttctcatggaagttcccatggacattcaggagtcaacagtagaggaggtataag 356
           |||| | ||||||||||| |||||||||||||| ||||||| || |||||||||||||||
Sbjct: 523 acagttatctcatggaagctcccatggacattctggagtcaccaatagaggaggtataag 582

                 
Query: 357 tgttgt 362
           ||||||
Sbjct: 583 tgttgt 588



 Score = 97.6 bits (49), Expect = 3e-19
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcgggcttacttaattcttctctgaacggatctgcgtcaaatcttccagatggtacg 60
           |||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||  | 
Sbjct: 260 atgtcggggttactaaattcttctctgaatggatctgcttcaaatcttccagatggcgct 319

                                        
Query: 61  gggcggtcttttgcgacgtctttctctgg 89
           |||||||||||||| || || ||||||||
Sbjct: 320 gggcggtcttttgctacatcattctctgg 348