Miyakogusa Predicted Gene

Lj0g3v0249719.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0249719.1 Non Chatacterized Hit- tr|I1KFL1|I1KFL1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.14219 PE,87.53,0,ABC
transporter transmembrane region,ABC transporter, transmembrane
domain, type 1; P-loop containin,CUFF.16338.1
         (1134 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC595106 similar to UniRef100_A7Q1C1 Cluster: Chromosom...   731   0.0  

>gnl|LJGI|DC595106 similar to UniRef100_A7Q1C1 Cluster: Chromosome chr10 scaffold_43,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_43, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 417

 Score =  731 bits (369), Expect = 0.0
 Identities = 405/417 (97%)
 Strand = Plus / Plus

                                                                       
Query: 555 cctacttctcagttacactttgaacataacaaatctcttgagtggtgccctcagacaagc 614
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1   cctacttctcagttacactttgaacataacaaatctcttgagcggtgccctcagacaagc 60

                                                                       
Query: 615 aagtagagctgagaacagtttaaatgcggttgagcgcgttgacacctatataaatttaga 674
           ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aagcagagctgagaacagtctaaatgcggttgagcgcgttgacacctatataaatttaga 120

                                                                       
Query: 675 atccgaggctccaggtatagttgaggaaaaccgtccaccaccaggatggccgacaactgg 734
           |||||||||||||||    | |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atccgaggctccaggggggggtgaggaaaaccgtccaccaccaggatggccgacaactgg 180

                                                                       
Query: 735 atcgattgagtttgagaatgttgttctcacatacaggcctgaacttcctccagtcctgca 794
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 181 atcgattgagtttgagaatgttgttctcacatacaggcctgaacttcctccagttctgca 240

                                                                       
Query: 795 tggagtgtctttcacagtatgtccaactgagaagataggggtagttggaagaactggtgc 854
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggagtgtctttcacagtatgtccaactgagaagataggggtagttggaagaactggtgc 300

                                                                       
Query: 855 aggaaagtctagcacgcttaatgcgttattccggattgtggaactacaaagaggaagaat 914
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggaaagtctagcatgcttaatgcgttattccggattgtggaactacaaagaggaagaat 360

                                                                    
Query: 915 cactattgatggttgtgatgtttcgacaattggactagcagatctgcgaaaagttct 971
           ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 361 cactattgatggttgtgatgtttcgaacattggactagcagatctgcgaaaagttct 417