Miyakogusa Predicted Gene
- Lj0g3v0249659.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0249659.1 Non Chatacterized Hit- tr|D7MDR2|D7MDR2_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,33.51,3e-17,seg,NULL,CUFF.16330.1
(636 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71636 weakly similar to UniRef100_Q7SD72 Cluster: Pre... 630 e-180
gnl|LJGI|TC74597 similar to UniRef100_Q84VZ3 Cluster: At5g52990;... 365 e-100
gnl|LJGI|BW615594 similar to UniRef100_A7PT43 Cluster: Chromosom... 98 8e-20
>gnl|LJGI|TC71636 weakly similar to UniRef100_Q7SD72 Cluster: Predicted protein; n=1;
Neurospora crassa|Rep: Predicted protein - Neurospora
crassa, partial (5%)
Length = 734
Score = 630 bits (318), Expect = e-180
Identities = 328/330 (99%), Gaps = 1/330 (0%)
Strand = Plus / Plus
Query: 1 atgcttggctttaaccccaccaaaacactccctcttctcccacaccgtcaaccaccgcac 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 405 atgcttggctttaaccccaccaaaccactccctcttctcccacaccgtcaaccaccgcac 464
Query: 61 ctacaccttcctcatcgaccctcccttcgtcttcttcgccatcttcgatcaccgc-acac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 465 ctacaccttcctcatcgaccctcccttcgtcttcttcgccatcttcgatcaccgccacac 524
Query: 120 caaatcccaaaccctcgccttcctccaccgcatcagatcctccctaaccgaaaccctcca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 caaatcccaaaccctcgccttcctccaccgcatcagatcctccctaaccgaaaccctcca 584
Query: 180 ccccctcaaggattcctcctcctcgtcctcgcctccgccgccgttgccaccgctctcgct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ccccctcaaggattcctcctcctcgtcctcgcctccgccgccgttgccaccgctctcgct 644
Query: 240 ccagacgcagtttgatttgatcctccgggagattcttcatctggatgacgggagcaccag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ccagacgcagtttgatttgatcctccgggagattcttcatctggatgacgggagcaccag 704
Query: 300 gtcgccgccgccggctgttgttggggtccc 329
||||||||||||||||||||||||||||||
Sbjct: 705 gtcgccgccgccggctgttgttggggtccc 734
>gnl|LJGI|TC74597 similar to UniRef100_Q84VZ3 Cluster: At5g52990; n=1; Arabidopsis
thaliana|Rep: At5g52990 - Arabidopsis thaliana
(Mouse-ear cress), partial (16%)
Length = 543
Score = 365 bits (184), Expect = e-100
Identities = 201/209 (96%)
Strand = Plus / Plus
Query: 428 ctgcgatggttgatgtgaacgacgaccttgtttcgctgccggcnnnnnnnacgaaggggg 487
||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 1 ctgcgatggttgatgtgaacgacgaccttgtttcgctgccggcggtggtgacgaagggtg 60
Query: 488 ttcccggagatcatcaccaccgccacaaggcgaaacacgtgtggaagaaacacgtgtggg 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcccggagatcatcaccaccgccacaaggcgaaacacgtgtggaagaaacacgtgtggg 120
Query: 548 tagtgctgctgcttgatttgtttgtctgtgcggttttgttcgtgatttggttgtgggttt 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagtgctgctgcttgatttgtttgtctgtgcggttttgttcgtgatttggttgtgggttt 180
Query: 608 gcagcgggttcaagtgcatgacctattga 636
|||||||||||||||||||||||||||||
Sbjct: 181 gcagcgggttcaagtgcatgacctattga 209
>gnl|LJGI|BW615594 similar to UniRef100_A7PT43 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 489
Score = 97.6 bits (49), Expect = 8e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 1 atgcttggctttaaccccaccaaaacactccctcttctcccacaccgtcaacc 53
|||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 437 atgcttggctttaaccccaccaaaccactccctcttctcccacaccgtcaacc 489