Miyakogusa Predicted Gene

Lj0g3v0249549.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0249549.2 Non Chatacterized Hit- tr|I1MML5|I1MML5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13151
PE,75,0,CRAL_TRIO,CRAL-TRIO domain; CRAL_TRIO_N,CRAL/TRIO, N-terminal
domain; seg,NULL; no description,CRAL/,CUFF.16315.2
         (1791 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS319979 similar to UniRef100_A7Q9E7 Cluster: Chromosom...   111   2e-23
gnl|LJGI|TC57929 similar to UniRef100_A7P8X1 Cluster: Chromosome...    60   5e-08

>gnl|LJGI|FS319979 similar to UniRef100_A7Q9E7 Cluster: Chromosome chr19 scaffold_66,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_66, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 553

 Score =  111 bits (56), Expect = 2e-23
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                       
Query: 256 cctaggcatgatgattatcacacattgttaaggtttctgaaagctagggattttaacatt 315
           |||||||||||||| ||  | ||||||||||||||||| |||||| ||||||||||||||
Sbjct: 436 cctaggcatgatgactactatacattgttaaggtttcttaaagctcgggattttaacatt 495

                                           
Query: 316 gagaagacgattcagatgtgggaggagatgct 347
           |||||||| |||||||||||||| || |||||
Sbjct: 496 gagaagacaattcagatgtgggaagaaatgct 527


>gnl|LJGI|TC57929 similar to UniRef100_A7P8X1 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (72%)
          Length = 1682

 Score = 60.0 bits (30), Expect = 5e-08
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 440 atcatggagttgataaggaaggtaggccagtttacattgagaggcttgggaaag 493
           ||||||| |||||||||||||| || || ||||||||||| |||||||| ||||
Sbjct: 676 atcatggtgttgataaggaaggaagacctgtttacattgaaaggcttggaaaag 729